Pan-genomics: Applications, challenges, and future prospects

D Barh, SC Soares, S Tiwari, VADC Azevedo - 2020 - books.google.com
Pan-genomics: Applications, Challenges, and Future Prospects covers current approaches,
challenges and future prospects of pan-genomics. The book discusses bioinformatics tools …

PanGeT: pan-genomics tool

I Yuvaraj, J Sridhar, D Michael, K Sekar - Gene, 2017 - Elsevier
A decade after the concept of Pan-genome was first introduced; research in this field has
spread its tentacles to areas such as pathogenesis of diseases, bacterial evolutionary …

Current status of pan-genome analysis for pathogenic bacteria

Y Kim, C Gu, HU Kim, SY Lee - Current opinion in biotechnology, 2020 - Elsevier
Highlights•Wealth of genome data are making pan-genome analysis increasingly
possible.•Pan-genome analysis is an effective approach to understand pathogenic …

Pangenomics in microbial and crop research: Progress, applications, and perspectives

SK Aggarwal, A Singh, M Choudhary, A Kumar… - Genes, 2022 - mdpi.com
Advances in sequencing technologies and bioinformatics tools have fueled a renewed
interest in whole genome sequencing efforts in many organisms. The growing availability of …

Seven quick tips for gene-focused computational pangenomic analysis

V Bonnici, D Chicco - BioData Mining, 2024 - Springer
Pangenomics is a relatively new scientific field which investigates the union of all the
genomes of a clade. The word pan means everything in ancient Greek; the term …

The pangenome: Diversity, dynamics and evolution of genomes

H Tettelin, D Medini - 2020 - library.oapen.org
This open access book offers the first comprehensive account of the pan-genome concept
and its manifold implications. The realization that the genetic repertoire of a biological …

[PDF][PDF] Computational pan-genomics: status, promises and challenges

Briefings in bioinformatics, 2018 - academic.oup.com
Many disciplines, from human genetics and oncology to plant breeding, microbiology and
virology, commonly face the challenge of analyzing rapidly increasing numbers of genomes …

Pangenomics comes of age: from bacteria to plant and animal applications

AA Golicz, PE Bayer, PL Bhalla, J Batley, D Edwards - Trends in Genetics, 2020 - cell.com
The pangenome refers to a collection of genomic sequence found in the entire species or
population rather than in a single individual; the sequence can be core, present in all …

PanWeb: a web interface for pan-genomic analysis

Y Pantoja, K Pinheiro, A Veras, F Araújo… - PLoS …, 2017 - journals.plos.org
With increased production of genomic data since the advent of next-generation sequencing
(NGS), there has been a need to develop new bioinformatics tools and areas, such as …

[PDF][PDF] A review of pangenome tools and recent studies

GS Vernikos - The pangenome: diversity, dynamics and evolution …, 2020 - library.oapen.org
With the advance of sequencing technologies, the landscape of genomic analysis has been
transformed, by moving from single strain to species (or even higher taxa)-wide genomic …