[PDF][PDF] Population genomics of fungal plant pathogens and the analyses of rapidly evolving genome compartments

CJ Eschenbrenner, A Feurtey… - Statistical Population …, 2020 - library.oapen.org
Genome sequencing of fungal pathogens have documented extensive variation in genome
structure and composition between species and in many cases between individuals of the …

Fungal genomics: an overview

AE Desjardins, D Bhatnagar - Applied Mycology and …, 2003 - books.google.com
With the advent of the genomics era during the last decade, we have witnessed a revolution
in our understanding of biological processes. Since 1995, the genomes, or genetic make-up …

Sources of fungal genetic variation and associating it with phenotypic diversity

JW Taylor, S Branco, C Gao, C Hann-Soden… - The Fungal …, 2017 - Wiley Online Library
Genetic variation is the stuff of evolution: if there is no variation, there can be no evolution.
This review of fungal genetic variation begins with a survey of its sources and then …

DemaDb: an integrated dematiaceous fungal genomes database

CS Kuan, SM Yew, CL Chan, YF Toh, KW Lee… - Database, 2016 - academic.oup.com
Many species of dematiaceous fungi are associated with allergic reactions and potentially
fatal diseases in human, especially in tropical climates. Over the past 10 years, we have …

Cross-disciplinary genomics approaches to studying emerging fungal infections

PN Ghosh, LM Brookes, HM Edwards, MC Fisher… - Life, 2020 - mdpi.com
Emerging fungal pathogens pose a serious, global and growing threat to food supply
systems, wild ecosystems, and human health. However, historic chronic underinvestment in …

FungiFun: a web-based application for functional categorization of fungal genes and proteins

S Priebe, J Linde, D Albrecht, R Guthke… - Fungal Genetics and …, 2011 - Elsevier
FungiFun assigns functional annotations to fungal genes or proteins and performs gene set
enrichment analysis. Based on three different classification methods (FunCat, GO and …

Genomic characterization of emerging human fungal pathogens

BM Barker, CA Cuomo, NP Govender - Frontiers in Genetics, 2021 - frontiersin.org
Human fungal pathogens pose a major clinical challenge with the emergence of new
species, expanded geographic ranges impacting new populations, and the increasing …

Seasons of change: Mechanisms of genome evolution in human fungal pathogens

RJ Fillinger, MZ Anderson - Infection, Genetics and Evolution, 2019 - Elsevier
Fungi are a diverse kingdom of organisms capable of thriving in various niches across the
world including those in close association with multicellular eukaryotes. Fungal pathogens …

Phylogenomics reveals extensive misidentification of fungal strains from the genus Aspergillus

JL Steenwyk, C Balamurugan, HA Raja… - Microbiology …, 2024 - Am Soc Microbiol
Modern taxonomic classification is often based on phylogenetic analyses of a few molecular
markers, although single-gene studies are still common. Here, we leverage genome-scale …

Fungal genomics

A Tsang - Briefings in functional genomics, 2014 - academic.oup.com
From inconspicuous microorganisms to moulds to mushrooms, the biodiversity of
filamentous fungi is enormous. They are the major decomposers of plant-derived biomass …