[HTML][HTML] Prediction of maize phenotypic traits with genomic and environmental predictors using gradient boosting frameworks

CC Westhues, GS Mahone, S da Silva… - Frontiers in plant …, 2021 - frontiersin.org
… usefulness to disentangle hidden relationships. Our objectives … absolute studentized conditional
residuals greater than three … study by running a Bayesian algorithm which models them …

[PDF][PDF] Genome-wide association studies in maize: praise and stargaze

Y Xiao, H Liu, L Wu, M Warburton, J Yan - Molecular plant, 2017 - cell.com
Maize (Zea mays L.) originated in the Balsas River basin of … facilitated by GWAS on
representative traits and a massive … The residual approach fits the residuals from a reduced mixed …

Utilizing trait networks and structural equation models as tools to interpret multi-trait genome-wide association studies

M Momen, MT Campbell, H Walia, G Morota - Plant methods, 2019 - Springer
may enhance our understanding of complex relationships … of genomic and residual
correlations among the four traits … multiple phenotypes using a Bayesian network that can serve …

[HTML][HTML] Genetic architecture of maize yield traits dissected by QTL mapping and GWAS in maize

…, H Zhang, H Hu, Y Wang, H Zhang, D Liu, L Wu, Z Nie… - The Crop Journal, 2022 - Elsevier
… are genes prioritized in a genome-wide association study (… Maize (Zea mays L.) is a worldwide
staple crop. The use of … , and ε ijk is the residual error. Broad-sense heritability ( h B 2 ) …

Genetic variation of growth dynamics in maize (Zea mays L.) revealed through automated non‐invasive phenotyping

MM Muraya, J Chu, Y Zhao, A Junker… - The Plant …, 2017 - Wiley Online Library
… low residual variance, showed that trait expression was highly … of genome-wide selection
(GS) procedures for trait prediction. … networks of genes representing epistatic relationships. …

Genome-enabled prediction of genetic values using radial basis function neural networks

JM González-Camacho, G de Los Campos… - Theoretical and Applied …, 2012 - Springer
… , (2) discuss the connection between these methods and … square distribution assigned to the
residual variance, and those of … , in which 21 maize data sets represented different traits and …

Leveraging prior biological knowledge improves prediction of tocochromanols in maize grain

R Tanaka, D Wu, X Li, LE Tibbs‐Cortes… - … Plant Genome, 2023 - Wiley Online Library
… most abundant tocochromanols in maize (Zea mays L.) grain is … trait) within and between
two panels of 1,462 and 242 maize … field experiments, residual covariance was assumed to be …

RNA sequencing reveals the complex regulatory network in the maize kernel

…, L Kang, Z Zhang, J Zhang, C He, X Du, Z Peng… - Nature …, 2013 - nature.com
… By connecting regulators and their target genes, a network … of quantitative traits in maize
using GWAS, as genomic SNPs … plants, the residual heterozygosis of inbred lines may also be a …

… Mapping QTL Detection Models for Hybrids Between Multiparental Populations from Two Heterotic Groups: Application to Biomass Production in Maize (Zea mays L.)

…, P Blanchard, A Charcosset, L Moreau - … : Genes, Genomes …, 2017 - academic.oup.com
… Identification of quantitative trait loci (QTL) involved in the … Such founder relationships
are a common feature in breeding … E h l x y z is the residual of the model E h l x y z → N ( 0 , …

Genome‐wide association for plant height and flowering time across 15 tropical maize populations under managed drought stress and well‐watered conditions in Sub …

JG Wallace, X Zhang, Y Beyene, K Semagn… - Crop …, 2016 - Wiley Online Library
… data from 15 biparental populations of maize (Zea mays L.) (>… traits have been extensively
studied in temperate maize … where V g is the genetic variance and V r is the residual variance. …