Assembly of microarrays for genome-wide measurement of DNA copy number
AM Snijders, N Nowak, R Segraves, S Blackwood… - Nature …, 2001 - nature.com
… assembled arrays of approximately 2,400 BAC clones for measurement of DNA copy number
… The arrays provide precise measurement (sd of log 2 ratios=0.05–0.10) in cell lines and …
… The arrays provide precise measurement (sd of log 2 ratios=0.05–0.10) in cell lines and …
Genome-wide analysis of DNA copy-number changes using cDNA microarrays
… used to measure DNA copy-number changes by cDNA microarray hybridization. Genomic
… ) and grew them according to the manufacturer's instructions. We snap froze primary breast …
… ) and grew them according to the manufacturer's instructions. We snap froze primary breast …
Methods and strategies for analyzing copy number variation using DNA microarrays
NP Carter - Nature genetics, 2007 - nature.com
… assay DNA in this intermediate size range, DNA microarrays … microarray technologies being
used for genome-wide CNV … -insert clone libraries were developed and clones assembled …
used for genome-wide CNV … -insert clone libraries were developed and clones assembled …
Genome-wide copy number profiling on high-density bacterial artificial chromosomes, single-nucleotide polymorphisms, and oligonucleotide microarrays: a platform …
JY Hehir-Kwa, M Egmont-Petersen, IM Janssen… - DNA …, 2007 - academic.oup.com
… a genome-wide probability that a copy-number variation with a particular size independent of
… minimally required sample size, we obtained an objective genome-wide resolution statistic. …
… minimally required sample size, we obtained an objective genome-wide resolution statistic. …
High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays
… for genome-wide analysis of DNA sequence copy number in … We demonstrate its ability to
measure copy number with high … (12162) following the instructions of the manufacturer, except …
measure copy number with high … (12162) following the instructions of the manufacturer, except …
Gene-resolution analysis of DNA copy number variation using oligonucleotide expression microarrays
… method for measuring genome-wide DNA copy number changes. … Since BAC aCGH microarray
and the graCNV microarray (… genome assembly version 35, coordinates of copy number …
and the graCNV microarray (… genome assembly version 35, coordinates of copy number …
High-resolution analysis of DNA copy number using oligonucleotide microarrays
… an ABI 3700 or ABI 3100 DNA analyzer as per the manufacturer's instructions. The data were
… estimation was calculated using the standard curve method for relative quantitation using …
… estimation was calculated using the standard curve method for relative quantitation using …
Whole genome DNA copy number changes identified by high density oligonucleotide arrays
J Huang, W Wei, J Zhang, G Liu, GR Bignell… - Human genomics, 2004 - Springer
… specified in the manufacturer's instructions. Samples comprising … measurements with
genome-wide copy number profiling. … for genome-wide copy number estimation using high-density …
genome-wide copy number profiling. … for genome-wide copy number estimation using high-density …
A comparison of DNA copy number profiling platforms
J Greshock, B Feng, C Nogueira, E Ivanova, I Perna… - Cancer research, 2007 - AACR
… Microarray-based assays designed to detect these chromosomal copy number alterations
on a genome-wide … platform, a log 2 copy number ratio was measured from raw data derived …
on a genome-wide … platform, a log 2 copy number ratio was measured from raw data derived …
Optimal design of oligonucleotide microarrays for measurement of DNA copy-number
… DNA microarrays composed of oligonucleotides attached to … Initially developed for the
measurement of gene expression of … method to measure DNA copy-number genome-wide. …
measurement of gene expression of … method to measure DNA copy-number genome-wide. …