Using next generation transcriptome sequencing to predict an ectomycorrhizal metabolome
PE Larsen, A Sreedasyam, G Trivedi, GK Podila… - BMC Systems …, 2011 - Springer
… The harvested mycorrhizal RNA is a mixture of transcripts … , we sequenced the mycorrhizal
transcriptome and identified the … The predicted ectomycorrhizal metabolome was constructed …
transcriptome and identified the … The predicted ectomycorrhizal metabolome was constructed …
Metabolomics and transcriptomics to decipher molecular mechanisms underlying ectomycorrhizal root colonization of an oak tree
… oak mycorrhizal roots … analysis confirmed that the metabolome of mycorrhizal oak roots is
significantly different from that of non-inoculated roots. Since in our experiment the mycorrhizal …
significantly different from that of non-inoculated roots. Since in our experiment the mycorrhizal …
Dual transcriptomic and metabolomic analyses provide novel insights into the role of vitamins A and B metabolism in ectomycorrhizal symbiosis between Pinus yunnanensis and …
K Su, J Yuan, R Wang, L Huang, J Zhan… - Physiologia …, 2024 - Wiley Online Library
… transcriptome and qRT-PCR analysis. The same three samples that were used for transcriptome
analysis… , were selected for non-targeted metabolome analyses. Because it is difficult to …
analysis… , were selected for non-targeted metabolome analyses. Because it is difficult to …
Combined metabolome and transcriptome analyses reveal the effects of mycorrhizal fungus Ceratobasidium sp. AR2 on the flavonoid accumulation in Anoectochilus …
Y Zhang, Y Li, X Chen, Z Meng, S Guo - International Journal of …, 2020 - mdpi.com
… hybridum were induced by mycorrhizal fungus through transcriptome analysis. Schliemann
et al. [… by mycorrhizal fungus Glomus intraradices through metabolome analyses. In our study, …
et al. [… by mycorrhizal fungus Glomus intraradices through metabolome analyses. In our study, …
Mycorrhiza-triggered transcriptomic and metabolomic networks impinge on herbivore fitness
M Kaling, A Schmidt, F Moritz, M Rosenkranz… - Plant …, 2018 - academic.oup.com
… that ectomycorrhizae prime wounding responses and shift resources from constitutive
phenol-based to specialized protective compounds. Consequently, symbiosis with ectomycorrhizal …
phenol-based to specialized protective compounds. Consequently, symbiosis with ectomycorrhizal …
Transcriptomics and metabolomics reveal the changes induced by arbuscular mycorrhizal fungi in Panax quinquefolius L.
Z Ran, X Chen, R Li, W Duan, Y Zhang… - Journal of the …, 2023 - Wiley Online Library
… We selected 6 DEGs to verify the accuracy of transcriptome sequencing results using qRT-PCR
which with increased and decreased expression levels, and these DEGs belong to the …
which with increased and decreased expression levels, and these DEGs belong to the …
Prediction of an Ectomycorrhizal Metabolome from Transcriptomic Data
PE Larsen, LJ Cseke, FR Collart - Molecular Microbial Ecology …, 2013 - Wiley Online Library
… a predicted model of the ECM metabolome. The model is consistent … analysis methods used
here for predicting metabolomic models of mycorrhizal systems from deep RNA sequencing …
here for predicting metabolomic models of mycorrhizal systems from deep RNA sequencing …
Exploring the transcriptome of mycorrhizal interactions
A Kohler, E Tisserant - Advances in Botanical Research, 2014 - Elsevier
… The most recent ones, microarrays and RNA sequencing, are compared in this chapter with
a … interactions, in order to predict the ectomycorrhizal metabolome of poplar and Laccaria …
a … interactions, in order to predict the ectomycorrhizal metabolome of poplar and Laccaria …
Metabolome adjustments in ectomycorrhizal Populus × canescens associated with strong promotion of plant growth by Paxillus involutus despite a very low root …
A Szuba, Ł Marczak, I Ratajczak - Tree Physiology, 2020 - academic.oup.com
… We examined the C/N status and performed metabolomic analyses of C-, P- and … mycorrhizal
root tips would result in low signals of resource exchange (i) and relatively low metabolome …
root tips would result in low signals of resource exchange (i) and relatively low metabolome …
Transcriptomics and metabolomics reveal effect of arbuscular mycorrhizal fungi on growth and development of apple plants
S Jing, Y Li, L Zhu, J Su, T Yang, B Liu, B Ma… - Frontiers in Plant …, 2022 - frontiersin.org
… analysis of metabolomic and transcriptomic datasets between the roots and shoots of apple
plants before and after inoculation with AMF. Based on our analysis… transcriptome analysis of …
plants before and after inoculation with AMF. Based on our analysis… transcriptome analysis of …
相关搜索
- deep rna sequencing
- ectomycorrhizal metabolome transcriptomic data
- flavonoid metabolism transcriptome sequencing
- transcriptome analysis arbuscular mycorrhizal fungi
- combined metabolome transcriptome analyses
- rna seq analysis arbuscular mycorrhizal symbiosis
- root metabolome mycorrhizal interactions
- ectomycorrhizal symbiosis metabolomic analyses
- root metabolome mycorrhizal phenotype
- ectomycorrhizal fungus transcriptome characterization
- ectomycorrhizal fungus paxillus involutus metabolomic analyses
- transcriptome profile arbuscular mycorrhizal status
- large scale genome sequencing mycorrhizal fungi
- mycorrhizal symbioses transcriptome profiling
- rna sequencing structural annotation
- transcriptomics and metabolomics arbuscular mycorrhizal fungi