摘要(中) 本篇研究整體性地分析Protein Data Bank (PDB) 中2,058 個X-ray 解析度優於2.0 Å
的non-homologous 蛋白質結構, 並進行不同主鏈構形區域propensity 的分析, 發現Asparagine …

本篇研究整體性地分析Protein Data Bank (PDB) 中2,058 個X-ray 解析度優於2.0 Å 的non-
homologous 蛋白質結構, 並進行不同主鏈構形區域propensity 的分析, 發現Asparagine (Asn) …

To clarify the positive role of side-chain conformation in the stability of protein secondary
structure (main-chain conformation), we successfully calculated the optimization structure of …

To clarify the positive role of side-chain conformation in the stability of protein secondary
structure (main-chain conformation), we successfully calculated the optimization structure of …

Background A reliable prediction of the Xaa-Pro peptide bond conformation would be a
useful tool for many protein structure calculation methods. We have analyzed the Protein …

The conformational preferences of azaphenylalanine-containing peptide were investigated
using a model compound, Ac-azaPhe-NHMe with ab initio method at the HF/3-21G and HF/6 …

Backbone torsion angles ɸ, ψ of a vast majority of nonglycine residues in proteins lay within
the peculiar insulated regions in the (ɸ, ψ) space assigned to the conformations allowed for …

Recently, non-enzymatic stereoinversions of aspartic acid (Asp) residues in proteins and
peptides have been reported. Here, we performed replica exchange molecular dynamics …

We have constructed a bank (FTTP) of tendentious factors of three states of three-peptide
units from PDB database based on conformational dihedral angle library and demonstrated …

The conformational properties of Alanine (Ala) residue have been investigated to
understand protein folding and develop force fields. In this work, we examined the neighbor …