Extensive Genomic Plasticity in Pseudomonas aeruginosa Revealed by Identification and Distribution Studies of Novel Genes among Clinical Isolates
K Shen, S Sayeed, P Antalis, J Gladitz… - Infection and …, 2006 - Am Soc Microbiol
… and in the current study we have extended these findings to include opportunistic pathogens.
Comparing the genomic plasticity characteristics among clinical strains of P. aeruginosa, S. …
Comparing the genomic plasticity characteristics among clinical strains of P. aeruginosa, S. …
Comparative Genomics of Nonoutbreak Pseudomonas aeruginosa Strains Underlines Genome Plasticity and Geographic Relatedness of the Global Clone ST235
…, J Pasternak, MDV Martino, P Severino - Genome Biology and …, 2018 - academic.oup.com
… This finding highlights how WGS of clinical isolates may … analysis showed that most of the
older strains, isolated between 1994 … explore this clade distribution of the here sequenced P. …
older strains, isolated between 1994 … explore this clade distribution of the here sequenced P. …
… characterization of a highly redundant Pseudomonas aeruginosa genomic library prepared from 12 clinical isolates: application to studies of gene distribution among …
G Erdos, S Sayeed, FZ Hu, PT Antalis, K Shen… - International journal of …, 2006 - Elsevier
… PCR-based gene distribution studies for the sequences … The genomic plasticity we observed
among the PA01 and … Apparently the novel nucleotide sequences that we detected are …
among the PA01 and … Apparently the novel nucleotide sequences that we detected are …
[HTML][HTML] Comparative genomics of clinical strains of Pseudomonas aeruginosa strains isolated from different geographic sites
… into 89 potential genomic loci (region of genomic plasticity) in the complete … Our analysis
showed that more than 60% of eye isolates clustered together … Twenty two clinical isolates of P. …
showed that more than 60% of eye isolates clustered together … Twenty two clinical isolates of P. …
[HTML][HTML] Genome plasticity favours double chromosomal Tn4401b-blaKPC-2 transposon insertion in the Pseudomonas aeruginosa ST235 clone
… distant cities, we found a broad population distribution of P. … This 9Ps50 isolate was previously
identified in 2006 by our … reveals that ST235 can be divided in two different genetic clades (…
identified in 2006 by our … reveals that ST235 can be divided in two different genetic clades (…
[HTML][HTML] Burkholderia pseudomallei genome plasticity associated with genomic island variation
S Tumapa, MTG Holden, M Vesaratchavest… - BMC genomics, 2008 - Springer
… variable distribution of genomic … (p = 0.04), and GI 11 was only detected in 4 isolates
belonging to ST 70. An analysis of the difference in GIs between environmental and clinical isolates …
belonging to ST 70. An analysis of the difference in GIs between environmental and clinical isolates …
[HTML][HTML] Comparative genomics and biological characterization of sequential Pseudomonas aeruginosa isolates from persistent airways infection
… to regions of genome plasticity. Further, comparative … of the clinical isolate RP73 to achieve
long-term chronic infection … ], our genetic characterization showed that RP73 isolate carries a …
long-term chronic infection … ], our genetic characterization showed that RP73 isolate carries a …
[HTML][HTML] Persistence and Microevolution of Pseudomonas aeruginosa in the Cystic Fibrosis Lung: A Single-Patient Longitudinal Genomic Study
…, M Benedet, E Piffer, G Dinnella, P Gualdi… - Frontiers in …, 2019 - frontiersin.org
… Convergence of phenotypic changes among clinical isolates … genomic studies have
revealed extensive strain genetic … genomic plasticity (RGPs) or GIs often acquired by horizontal …
revealed extensive strain genetic … genomic plasticity (RGPs) or GIs often acquired by horizontal …
Pseudomonas aeruginosa: a clinical and genomics update
…, C Mirande, A Oliver, P Moons… - FEMS Microbiology …, 2021 - academic.oup.com
… and posterior sample culture to identify bacteria and determine their antibiotic … This metabolic
plasticity allows P. … We showed that patients with prior exposure to antibiotics, especially …
plasticity allows P. … We showed that patients with prior exposure to antibiotics, especially …
[HTML][HTML] Phenotypic and Genomic Variability of Serial Peri-Lung Transplantation Pseudomonas aeruginosa Isolates From Cystic Fibrosis Patients
R Datar, A Coello Pelegrin, S Orenga… - Frontiers in …, 2021 - frontiersin.org
… genomic plasticity, assessing the whole genome sequence and identifying antimicrobial
resistance (AMR) genes … of genomic features revealed various AMR and virulence genes. The …
resistance (AMR) genes … of genomic features revealed various AMR and virulence genes. The …