Losses in microbial functional diversity reduce the rate of key soil processes
The consequences of microbial functional diversity loss on key ecosystem processes remain
debatable due to lack of firm evidence from observational or manipulative experiments for a …
debatable due to lack of firm evidence from observational or manipulative experiments for a …
Distinct growth strategies of soil bacteria as revealed by large-scale colony tracking
M Ernebjerg, R Kishony - Applied and environmental microbiology, 2012 - Am Soc Microbiol
Our understanding of microbial ecology has been significantly furthered in recent years by
advances in sequencing techniques, but comprehensive surveys of the phenotypic …
advances in sequencing techniques, but comprehensive surveys of the phenotypic …
Digging deeper to find unique microbial communities: the strong effect of depth on the structure of bacterial and archaeal communities in soil
Microorganisms exist throughout the soil profile and those microorganisms living in sub-
surface horizons likely play key roles in nutrient cycling and soil formation. However, the …
surface horizons likely play key roles in nutrient cycling and soil formation. However, the …
Relic DNA is abundant in soil and obscures estimates of soil microbial diversity
Extracellular DNA from dead microorganisms can persist in soil for weeks to years 1–3.
Although it is implicitly assumed that the microbial DNA recovered from soil predominantly …
Although it is implicitly assumed that the microbial DNA recovered from soil predominantly …
Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale
Soils harbor enormously diverse bacterial populations, and soil bacterial communities can
vary greatly in composition across space. However, our understanding of the specific …
vary greatly in composition across space. However, our understanding of the specific …
Tracking of the activity of individual bacteria in temperate forest soils shows guild-specific responses to seasonality
Bacteria belong to the key players in the carbon cycling in forest soils and thus affect the
global C balance. Our understanding of bacterial contribution to ecosystem processes relies …
global C balance. Our understanding of bacterial contribution to ecosystem processes relies …
Active and total prokaryotic communities in dryland soils
R Angel, Z Pasternak, MIM Soares… - FEMS microbiology …, 2013 - academic.oup.com
The relationship between total and metabolically active soil microbial communities can
change drastically with environment. In dry lands, water availability is a key factor limiting …
change drastically with environment. In dry lands, water availability is a key factor limiting …
[HTML][HTML] Back to the future of soil metagenomics
Direct extraction and characterization of microbial community DNA through PCR amplicon
surveys and metagenomics has revolutionized the study of environmental microbiology and …
surveys and metagenomics has revolutionized the study of environmental microbiology and …
Microbial diversity and function in soil: from genes to ecosystems
V Torsvik, L Øvreås - Current opinion in microbiology, 2002 - Elsevier
Soils sustain an immense diversity of microbes, which, to a large extent, remains
unexplored. A range of novel methods, most of which are based on rRNA and rDNA …
unexplored. A range of novel methods, most of which are based on rRNA and rDNA …
[HTML][HTML] Monitoring complex bacterial communities using culture-independent molecular techniques: application to soil environment
L Ranjard, F Poly, S Nazaret - Research in microbiology, 2000 - Elsevier
Over the last decade, important advances in molecular biology led to the development of
culture-independent approaches to describing bacterial communities. These new strategies …
culture-independent approaches to describing bacterial communities. These new strategies …