Transcript profiling reveals complex auxin signalling pathway and transcription regulation involved in dedifferentiation and redifferentiation during somatic …

X Yang, X Zhang, D Yuan, F Jin, Y Zhang, J Xu - BMC plant biology, 2012 - Springer
Background Somatic embryogenesis (SE), by which somatic cells of higher plants can
dedifferentiate and reorganize into new plants, is a notable illustration of cell totipotency …

T ranscriptome Profiling Reveals Auxin and Cytokinin Regulating Somatic Embryogenesis in Different Sister Lines of Cotton Cultivar CCRI24

Z Xu, C Zhang, X Zhang, C Liu, Z Wu… - Journal of integrative …, 2013 - Wiley Online Library
To get a broader view on the molecular mechanisms underlying somatic embryogenesis
(SE) in cotton (Gossypium hirsutum L.), global analysis of cotton transcriptome dynamics …

Metabolome and transcriptome association analysis reveals dynamic regulation of purine metabolism and flavonoid synthesis in transdifferentiation during somatic …

H Guo, H Guo, L Zhang, Z Tang, X Yu, J Wu… - International Journal of …, 2019 - mdpi.com
Plant regeneration via somatic embryogenesis (SE) is a key step during genetic
engineering. In the current study, integrated widely targeted metabolomics and RNA …

ROS homeostasis regulates somatic embryogenesis via the regulation of auxin signaling in cotton

T Zhou, X Yang, K Guo, J Deng, J Xu, W Gao… - Molecular & Cellular …, 2016 - ASBMB
Somatic embryogenesis (SE) is a versatile model for understanding the mechanisms of plant
embryogenesis and a useful tool for plant propagation. To decipher the intricate molecular …

De novo transcriptome analysis reveals insights into dynamic homeostasis regulation of somatic embryogenesis in upland cotton (G. hirsutum L.)

WH Cheng, HG Zhu, WG Tian, SH Zhu, XP Xiong… - Plant Molecular …, 2016 - Springer
Plant regeneration via somatic embryogenesis (SE) is the key step for genetic improvement
of cotton (Gossypium hirsutum L.) through genetic engineering mediated by Agrobacteria …

Single-cell transcriptome atlas reveals somatic cell embryogenic differentiation features during regeneration

H Guo, L Zhang, H Guo, X Cui, Y Fan, T Li, X Qi… - Plant …, 2024 - academic.oup.com
Understanding somatic cell totipotency remains a challenge facing scientific inquiry today.
Plants display remarkable cell totipotency expression, illustrated by single-cell differentiation …

Comparative transcriptome analysis between somatic embryos (SE s) and zygotic embryos in cotton: evidence for stress response functions in SE development

F Jin, L Hu, D Yuan, J Xu, W Gao, L He… - Plant Biotechnology …, 2014 - Wiley Online Library
As a product of asexual reproduction in plants, the somatic embryo (SE) differentiates into a
new plantlet via a zygotic embryogenesis‐like process. Here, we present the phenotypic and …

Genome-wide chromatin accessibility landscape and dynamics of transcription factor networks during ovule and fiber development in cotton

Y Bao, Y Wei, Y Liu, J Gao, S Cheng, G Liu, Q You… - BMC biology, 2023 - Springer
Background The development of cotton fiber is regulated by the orchestrated binding of
regulatory proteins to cis-regulatory elements associated with developmental genes. The cis …

iTRAQ-based comparative proteomic analysis provides insights into somatic embryogenesis in Gossypium hirsutum L.

HG Zhu, WH Cheng, WG Tian, YJ Li, F Liu, F Xue… - Plant Molecular …, 2018 - Springer
Key message iTRAQ based proteomic identified key proteins and provided new insights into
the molecular mechanisms underlying somatic embryogenesis in cotton. Abstract Somatic …

Chromatin reorganization and endogenous auxin/cytokinin dynamic activity during somatic embryogenesis of cultured cotton cell

F Zeng, X Zhang, S Jin, L Cheng, S Liang, L Hu… - Plant cell, tissue and …, 2007 - Springer
We conducted a systematic assessment and comparative study on the biochemical and
cellular characteristics of cultured cotton cells during the entire process of somatic …