Phylogenomic and structural analyses of 18 complete plastomes across nearly all families of early-diverging eudicots, including an angiosperm-wide analysis of IR …
The grade of early-diverging eudicots includes five major lineages: Ranunculales,
Trochodendrales, Buxales, Proteales and Sabiaceae. To examine the evolution of plastome …
Trochodendrales, Buxales, Proteales and Sabiaceae. To examine the evolution of plastome …
Diversification of Rosaceae since the Late Cretaceous based on plastid phylogenomics
Phylogenetic relationships in Rosaceae have long been problematic because of frequent
hybridisation, apomixis and presumed rapid radiation, and their historical diversification has …
hybridisation, apomixis and presumed rapid radiation, and their historical diversification has …
Plastid genome sequencing, comparative genomics, and phylogenomics: current status and prospects
L Gao, YJ SU, T Wang - Journal of Systematics and Evolution, 2010 - Wiley Online Library
More than 190 plastid genomes have been completely sequenced during the past two
decades due to advances in DNA sequencing technologies. Based on this unprecedented …
decades due to advances in DNA sequencing technologies. Based on this unprecedented …
Robust inference of monocot deep phylogeny using an expanded multigene plastid data set
SW Grahan, JM Zgurski… - Aliso: A Journal of …, 2006 - scholarship.claremont.edu
We use multiple photosynthetic, chlororespiratory, and plastid translation apparatus loci and
their associated noncoding regions (ca. 16 kb per taxon, prior to alignment) to make strongly …
their associated noncoding regions (ca. 16 kb per taxon, prior to alignment) to make strongly …
[HTML][HTML] Characterizing gene tree conflict in plastome-inferred phylogenies
Evolutionary relationships among plants have been inferred primarily using chloroplast data.
To date, no study has comprehensively examined the plastome for gene tree conflict. Using …
To date, no study has comprehensively examined the plastome for gene tree conflict. Using …
Phylotranscriptomic analysis of the origin and early diversification of land plants
Reconstructing the origin and evolution of land plants and their algal relatives is a
fundamental problem in plant phylogenetics, and is essential for understanding how critical …
fundamental problem in plant phylogenetics, and is essential for understanding how critical …
Whole plastome sequencing reveals deep plastid divergence and cytonuclear discordance between closely related balsam poplars, P opulus balsamifera and P …
As molecular phylogenetic analyses incorporate evergreater numbers of loci, cases of
cytonuclear discordance–the phenomenon in which nuclear gene trees deviate significantly …
cytonuclear discordance–the phenomenon in which nuclear gene trees deviate significantly …
Phylogenetic analysis of 83 plastid genes further resolves the early diversification of eudicots
Although Pentapetalae (comprising all core eudicots except Gunnerales) include≈ 70% of
all angiosperms, the origin of and relationships among the major lineages of this clade have …
all angiosperms, the origin of and relationships among the major lineages of this clade have …
[HTML][HTML] Highly resolved papilionoid legume phylogeny based on plastid phylogenomics
Comprising 501 genera and around 14,000 species, Papilionoideae is not only the largest
subfamily of Fabaceae (Leguminosae; legumes), but also one of the most extraordinarily …
subfamily of Fabaceae (Leguminosae; legumes), but also one of the most extraordinarily …
Phylotranscriptomics of Theaceae: generic-level relationships, reticulation and whole-genome duplication
Abstract Background and Aims Theaceae, with three tribes, nine genera and more than 200
species, are of great economic and ecological importance. Recent phylogenetic analyses …
species, are of great economic and ecological importance. Recent phylogenetic analyses …