MBGD update 2010: toward a comprehensive resource for exploring microbial genome diversity
I Uchiyama, T Higuchi, M Kawai - Nucleic acids research, 2010 - academic.oup.com
The microbial genome database (MBGD) for comparative analysis is a platform for microbial
comparative genomics based on automated ortholog group identification. A prominent …
comparative genomics based on automated ortholog group identification. A prominent …
MBGD update 2013: the microbial genome database for exploring the diversity of microbial world
I Uchiyama, M Mihara, H Nishide… - Nucleic acids …, 2012 - academic.oup.com
The microbial genome database for comparative analysis (MBGD, available at http://mbgd.
genome. ad. jp/) is a platform for microbial genome comparison based on orthology …
genome. ad. jp/) is a platform for microbial genome comparison based on orthology …
MBGD: a platform for microbial comparative genomics based on the automated construction of orthologous groups
I Uchiyama - Nucleic acids research, 2007 - academic.oup.com
The microbial genome database for comparative analysis (MBGD) is a comprehensive
platform for microbial comparative genomics. The central function of MBGD is to create …
platform for microbial comparative genomics. The central function of MBGD is to create …
MBGD update 2015: microbial genome database for flexible ortholog analysis utilizing a diverse set of genomic data
I Uchiyama, M Mihara, H Nishide… - Nucleic acids …, 2015 - academic.oup.com
The microbial genome database for comparative analysis (MBGD)(available at http://mbgd.
genome. ad. jp/) is a comprehensive ortholog database for flexible comparative analysis of …
genome. ad. jp/) is a comprehensive ortholog database for flexible comparative analysis of …
MBGD: microbial genome database for comparative analysis
I Uchiyama - Nucleic acids research, 2003 - academic.oup.com
MBGD is a workbench system for comparative analysis of completely sequenced microbial
genomes. The central function of MBGD is to create an orthologous gene classification table …
genomes. The central function of MBGD is to create an orthologous gene classification table …
[HTML][HTML] MGnify genomes: a resource for biome-specific microbial genome catalogues
TA Gurbich, A Almeida, M Beracochea, T Burdett… - Journal of Molecular …, 2023 - Elsevier
An increasingly common output arising from the analysis of shotgun metagenomic datasets
is the generation of metagenome-assembled genomes (MAGs), with tens of thousands of …
is the generation of metagenome-assembled genomes (MAGs), with tens of thousands of …
MBGD update 2018: microbial genome database based on hierarchical orthology relations covering closely related and distantly related comparisons
I Uchiyama, M Mihara, H Nishide, H Chiba… - Nucleic acids …, 2019 - academic.oup.com
Abstract The Microbial Genome Database for Comparative Analysis (MBGD) is a database
for comparative genomics based on comprehensive orthology analysis of bacteria, archaea …
for comparative genomics based on comprehensive orthology analysis of bacteria, archaea …
POGO-DB—a database of pairwise-comparisons of genomes and conserved orthologous genes
Y Lan, JC Morrison, R Hershberg… - Nucleic acids …, 2014 - academic.oup.com
Abstract POGO-DB (http://pogo. ece. drexel. edu/) provides an easy platform for comparative
microbial genomics. POGO-DB allows users to compare genomes using pre-computed …
microbial genomics. POGO-DB allows users to compare genomes using pre-computed …
CMG-biotools, a free workbench for basic comparative microbial genomics
Background Today, there are more than a hundred times as many sequenced prokaryotic
genomes than were present in the year 2000. The economical sequencing of genomic DNA …
genomes than were present in the year 2000. The economical sequencing of genomic DNA …
HOBACGEN: database system for comparative genomics in bacteria
We present here HOBACGEN, a database system devoted to comparative genomics in
bacteria. HOBACGEN contains all available protein genes from bacteria, archaea, and …
bacteria. HOBACGEN contains all available protein genes from bacteria, archaea, and …