NeuronCyto II: An automatic and quantitative solution for crossover neural cells in high throughput screening

KH Ong, J De, L Cheng, S Ahmed, W Yu - Cytometry Part A, 2016 - Wiley Online Library
Microscopy is a fundamental technology driving new biological discoveries. Today
microscopy allows a large number of images to be acquired using, for example, High …

MorphoNeuroNet: an automated method for dense neurite network analysis

G Pani, WH De Vos, N Samari… - Cytometry Part …, 2014 - Wiley Online Library
High content cellbased screens are rapidly gaining popularity in the context of neuronal
regeneration studies. To analyze neuronal morphology, automatic image analysis pipelines …

NeuronMetrics: software for semi-automated processing of cultured neuron images

ML Narro, F Yang, R Kraft, C Wenk, A Efrat, LL Restifo - Brain research, 2007 - Elsevier
Using primary cell culture to screen for changes in neuronal morphology requires
specialized analysis software. We developed NeuronMetrics™ for semi-automated …

Automated neurite labeling and analysis in fluorescence microscopy images

G Xiong, X Zhou, A Degterev, L Ji… - Cytometry Part A: The …, 2006 - Wiley Online Library
Background: To investigate the intricate nervous processes involved in many biological
activities by computerized image analysis, accurate and reproducible labeling and …

WISneuromath enables versatile high throughput analyses of neuronal processes

I Rishal, O Golani, M Rajman, B Costa… - Developmental …, 2013 - Wiley Online Library
Automated analyses of neuronal morphology are important for quantifying connectivity and
circuitry in vivo, as well as in high content imaging of primary neuron cultures. The currently …

HCA-vision: Automated neurite outgrowth analysis

D Wang, R Lagerstrom, C Sun… - Journal of …, 2010 - journals.sagepub.com
Automating the analysis of neurons in culture represents a key aspect of the search for
neuroactive compounds. A number of commercial neurite analysis software packages tend …

Quantitative neurite outgrowth measurement based on image segmentation with topological dependence

W Yu, HK Lee, S Hariharan, W Bu… - Cytometry Part A: The …, 2009 - Wiley Online Library
The study of neuronal morphology and neurite outgrowth has been enhanced by the
combination of imaging informatics and high content screening, in which thousands of …

GAIN: A graphical method to automatically analyze individual neurite outgrowth

BL Long, H Li, A Mahadevan, T Tang, K Balotin… - Journal of neuroscience …, 2017 - Elsevier
Background Neurite outgrowth is a metric widely used to assess the success of in vitro
neural stem cell differentiation or neuron reprogramming protocols and to evaluate high …

Design and validation of a tool for neurite tracing and analysis in fluorescence microscopy images

E Meijering, M Jacob, JCF Sarria… - Cytometry Part A: the …, 2004 - Wiley Online Library
Background For the investigation of the molecular mechanisms involved in neurite
outgrowth and differentiation, accurate and reproducible segmentation and quantification of …

Automated analysis of neurite branching in cultured cortical neurons using HCAVision

P Vallotton, R Lagerstrom, C Sun… - Cytometry Part A …, 2007 - Wiley Online Library
Manual neuron tracing is a very laborintensive task. In the drug screening context, the
sheer number of images to process means that this approach is unrealistic. Moreover, the …