Bioinformatics for human microbiome

A Ghosh, S Firdous, S Saha - Advances in Bioinformatics, 2021 - Springer
… In this chapter, the bioinformatics aspects of microbiome data analyses have been briefly …
The chapter also discusses the known and putative applications of human microbiome

A guide to human microbiome research: study design, sample collection, and bioinformatics analysis

XB Qian, T Chen, YP Xu, L Chen, FX Sun… - Chinese Medical …, 2020 - mednexus.org
… a bioinformatics background with an easy-to-understand summary of the concepts and
technologies used in microbiome … , and bioinformatics analysis used in microbiome research. …

Bioinformatics for the human microbiome project

D Gevers, M Pop, PD Schloss… - PLoS Computational …, 2012 - journals.plos.org
Microbes inhabit virtually all sites of the human body, yet we know very little about the role
they play in our health. In recent years, there has been increasing interest in studying human-…

Deciphering the human microbiome using next-generation sequencing data and bioinformatics approaches

Y Kim, IS Koh, M Rho - Methods, 2015 - Elsevier
… of human microbiome, and highlights the results of several large-scale human microbiome
studies… It is becoming increasingly evident that dysbiosis of the gut microbiome is strongly …

Human microbiome acquisition and bioinformatic challenges in metagenomic studies

V D'Argenio - International journal of molecular sciences, 2018 - mdpi.com
The study of the human microbiome has become a very popular topic. Our microbial counterpart,
in fact, appears to play an important role in human physiology and health maintenance. …

Bioinformatics in microbiome analysis

Y Hao, Z Pei, SM Brown - Methods in Microbiology, 2017 - Elsevier
… associated with the human body are referred to as the microbiome. This approach has
received increasing scientific attention due to funding through the Human Microbiome Project (…

A review on the application of bioinformatics tools in food microbiome studies

R Chelliah, E Banan-MwineDaliri, I Khan… - … in Bioinformatics, 2022 - academic.oup.com
… the environment and in human hosts is critical for determining human–microbial interactions
[72]. We emphasize the most recent bioinformatics techniques for analyzing metagenomic …

An introduction to next generation sequencing bioinformatic analysis in gut microbiome studies

B Gao, L Chi, Y Zhu, X Shi, P Tu, B Li, J Yin, N Gao… - Biomolecules, 2021 - mdpi.com
… of different types of sequencing data in the gut microbiome studies, which help to extend
our knowledge in the role gut microbiome plays in human health and disease pathogenesis. …

[HTML][HTML] Probing the diversity of healthy oral microbiome with bioinformatics approaches

JH Moon, JH Lee - BMB reports, 2016 - ncbi.nlm.nih.gov
… Rapidly developing sequencing methods and analytical techniques are enhancing our
ability to understand the human microbiome, leading to the concept of a ‘personal …

Getting started with microbiome analysis: sample acquisition to bioinformatics

R Kumar, P Eipers, RB Little, M Crowley… - … protocols in human …, 2014 - Wiley Online Library
Historically, in order to study microbes, it was necessary to grow them in the laboratory. It was
clear though that many microbe communities were refractory to study because none of the …