CLO: the cell line ontology

S Sarntivijai, Y Lin, Z Xiang, TF Meehan… - Journal of biomedical …, 2014 - Springer
… 2,000 cell line cells from the RIKEN BRC Cell Bank to CLO. … , CLO consists of over 38,000
terms for various cell line cells. These are mostly cell line information obtained from cell line

The cell line ontology-based representation, integration and analysis of cell lines used in China

H Pan, X Bian, S Yang, Y He, X Yang, Y Liu - BMC bioinformatics, 2019 - Springer
… The Chinese National Infrastructure of Cell Line stores and distributes cell lines for biomedical
… the information of NICR cell lines into the community-based Cell Line Ontology (CLO). …

[PDF][PDF] Cell Line Ontology: Redesigning the Cell Line Knowledgebase to Aid Integrative Translational Informatics.

S Sarntivijai, Z Xiang, TF Meehan, AD Diehl, U Vempati… - ICBO, 2011 - academia.edu
… , design methodology, and content of the Cell Line OntologyCLO. … a cell line term is
imported from the Coriell Cell Line ontology, we have provided a cross reference to the ontology

Ontological representation, integration, and analysis of LINCS cell line cells and their cellular responses

E Ong, J Xie, Z Ni, Q Liu, S Sarntivijai, Y Lin… - BMC …, 2017 - Springer
cell lines. The community-based Cell Line Ontology (CLO) is selected as the default ontology
… In current CLO, we assert the two Japan cell bank cell line cell terms as subclasses of the …

On the ontology based representation of cell lines

M Ganzinger, S He, K Breuhahn, P Knaup - PLoS One, 2012 - journals.plos.org
… The other cell line ontology is abbreviated by the acronym CLO. The developers of CLO
like BAO announced to work together to develop a comprehensive cell line ontology. This is a …

Comparison, alignment, and synchronization of cell line information between CLO and EFO

E Ong, S Sarntivijai, S Jupp, H Parkinson, Y He - Bmc Bioinformatics, 2017 - Springer
… therefore that EFO reuses the cell line representation from the Cell Line Ontology (CLO).
There are, … a common ontology design pattern for representing cell lines in both EFO and CLO. …

[PDF][PDF] The Cell Line Ontology Integration and Analysis of the Knowledge of LINCS Cell Lines.

E Ong, J Xie, Z Ni, Q Liu, Y Lin, V Stathias, C Chung… - ICBO …, 2016 - ceur-ws.org
Cell Line Ontology (CLO) is a communitybased ontology representing and classifying cell
lines … use case on how CLO can be updated and applied to support cell line research from a …

OSCI: standardized stem cell ontology representation and use cases for stem cell investigation

Y He, WD Duncan, DJ Cooper, J Hansen, R Iyengar… - BMC …, 2019 - Springer
… OSCI imports stem cell and cell line terms from CL and CLO, and investigation-related terms
from existing ontologies. … The Cell Line Ontology (CLO) is an ontology in the domain of cell

Cells in ExperimentaL Life Sciences (CELLS-2018): capturing the knowledge of normal and diseased cells with ontologies

S Sarntivijai, Y He, AD Diehl - BMC bioinformatics, 2019 - Springer
… (CCL) and the Ontology for Stem Cell Investigations (OSCI), were reported in the workshop.
Cell Line Ontology (CLO) framework was applied and extended to represent cell line cells

The Cell Ontology 2016: enhanced content, modularization, and ontology interoperability

AD Diehl, TF Meehan, YM Bradford, MH Brush… - Journal of biomedical …, 2016 - Springer
… does in fact include a branch for in vitro cells. In … cell types, representatives of the CL, Cell
Line Ontology (CLO) [25], Reagent Ontology (ReO) [26], the Gene Ontology [9], and Ontology