Evolution and diversity of TGF-β pathways are linked with novel developmental and behavioral traits

WS Lo, M Roca, M Dardiry, M Mackie… - Molecular Biology …, 2022 - academic.oup.com
WS Lo, M Roca, M Dardiry, M Mackie, G Eberhardt, H Witte, R Hong, RJ Sommer
Molecular Biology and Evolution, 2022academic.oup.com
Transforming growth factor-β (TGF-β) signaling is essential for numerous biologic functions.
It is a highly conserved pathway found in all metazoans including the nematode
Caenorhabditis elegans, which has also been pivotal in identifying many components.
Utilizing a comparative evolutionary approach, we explored TGF-β signaling in nine
nematode species and revealed striking variability in TGF-β gene frequency across the
lineage. Of the species analyzed, gene duplications in the DAF-7 pathway appear common …
Abstract
Transforming growth factor-β (TGF-β) signaling is essential for numerous biologic functions. It is a highly conserved pathway found in all metazoans including the nematode Caenorhabditis elegans, which has also been pivotal in identifying many components. Utilizing a comparative evolutionary approach, we explored TGF-β signaling in nine nematode species and revealed striking variability in TGF-β gene frequency across the lineage. Of the species analyzed, gene duplications in the DAF-7 pathway appear common with the greatest disparity observed in Pristionchus pacificus. Specifically, multiple paralogues of daf-3, daf-4 and daf-7 were detected. To investigate this additional diversity, we induced mutations in 22 TGF-β components and generated corresponding double, triple, and quadruple mutants revealing both conservation and diversification in function. Although the DBL-1 pathway regulating body morphology appears highly conserved, the DAF-7 pathway exhibits functional divergence, notably in some aspects of dauer formation. Furthermore, the formation of the phenotypically plastic mouth in P. pacificus is partially influenced through TGF-β with the strongest effect in Ppa-tag-68. This appears important for numerous processes in P. pacificus but has no known function in C. elegans. Finally, we observe behavioral differences in TGF-β mutants including in chemosensation and the establishment of the P. pacificus kin-recognition signal. Thus, TGF-β signaling in nematodes represents a stochastic genetic network capable of generating novel functions through the duplication and deletion of associated genes.
Oxford University Press
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