High-resolution mapping of epigenetic modifications of the rice genome uncovers interplay between DNA methylation, histone methylation, and gene expression
… We present high-resolution maps of DNA … in rice (Oryza sativa) shoots and cultured cells.
This analysis reveals combinatorial interactions between these epigenetic modifications and …
This analysis reveals combinatorial interactions between these epigenetic modifications and …
Genomic variations combined with epigenetic modifications rewire open chromatin in rice
M Li, Y Feng, Q Han, Y Yang, Y Shi, D Zheng… - Plant …, 2023 - academic.oup.com
… In conclusion, our study provides a genome-wide analysis that allows us to … changes
alone or combined with epigenetic modifications. Importantly, it can be extended to wider rice …
alone or combined with epigenetic modifications. Importantly, it can be extended to wider rice …
High-resolution mapping of open chromatin in the rice genome
… Gene expression is controlled by the complex interaction of … Here, we describe high-resolution
maps of DH sites in rice … with rice DH sites, including their epigenetic modifications, …
maps of DH sites in rice … with rice DH sites, including their epigenetic modifications, …
High-resolution mapping of H4K16 and H3K23 acetylation reveals conserved and unique distribution patterns in Arabidopsis and rice
… uncovering its function in plants. In this study, we generated first … model in which multiple
epigenetic modifications act in a … Genetic evidence for an interaction between SIR3 and histone …
epigenetic modifications act in a … Genetic evidence for an interaction between SIR3 and histone …
[HTML][HTML] Pup1 QTL Regulates Gene Expression Through Epigenetic Modification of DNA Under Phosphate Starvation Stress in Rice
… Using whole-genome bisulfite sequencing of a pair of rice [Pusa-44 and its near-isogenic …
We observed 13–15% of total cytosines to be methylated in the rice genome, which increased …
We observed 13–15% of total cytosines to be methylated in the rice genome, which increased …
Global epigenetic and transcriptional trends among two rice subspecies and their reciprocal hybrids
… understanding of global interaction patterns between transcription and epigenetic … integrated
high-resolution maps of genomic distributions of DNA methylation and histone modifications…
high-resolution maps of genomic distributions of DNA methylation and histone modifications…
DNA methylome analysis provides insights into gene regulatory mechanism for better performance of rice under fluctuating environmental conditions: epigenomics of …
… Dynamic epigenetic changes are necessary for appropriate … from the database for Rice
Genome Annotation Project. … Our expression correlation/interaction network analysis of the genes …
Genome Annotation Project. … Our expression correlation/interaction network analysis of the genes …
[图书][B] Insights into the Role of Chromatin Structure on Transcriptional Variation across Genotype, Environment, and Developmental Stage in Oryza sativa
MT McGowan - 2022 - search.proquest.com
… Until recently, obtaining high-resolution predictions of … with low external interaction do appear
to be a common genome-wide … Histone modifications have been found to have patterns in …
to be a common genome-wide … Histone modifications have been found to have patterns in …
[HTML][HTML] Single-base resolution maps of cultivated and wild rice methylomes and regulatory roles of DNA methylation in plant gene expression
… To examine the rice genomic methylation landscape and … of epigenetic modifications in rice,
including DNA and histone … to comprehensively unveil high resolution rice methylomes and …
including DNA and histone … to comprehensively unveil high resolution rice methylomes and …
[HTML][HTML] Dynamics and functional interplay of histone lysine butyrylation, crotonylation, and acetylation in rice under starvation and submergence
… histone deacylation activities of several rice HDACs. Our results indicate that Kbu and Kcr
are robust histone modification … of histone Kbu and Kcr modifications in the rice genome. a …
are robust histone modification … of histone Kbu and Kcr modifications in the rice genome. a …