Mechanistic insights into COVID-19 by global analysis of the SARS-CoV-2 3CLpro substrate degradome

I Pablos, Y Machado, HCR de Jesus, Y Mohamud… - Cell reports, 2021 - cell.com
… reveal extensive disruption of cellular protein interaction networks resulting fromsubstrate
degradome atlas provides a powerful resource to inspire mechanistic studies of COVID-19

3CLpro: The discovery of host cell substrates and its relevance as a drug target for SARS-CoV-2 variants of concern

K Lichimo - Undergraduate Journal of Experimental Microbiology …, 2022 - ojs.library.ubc.ca
… Since the onset of COVID-19, 3CLpro has been considered as … 3CLpro host cell degradome,
it nonetheless provides insightMechanistic insights into COVID-19 by global analysis of the …

Progress on SARS-CoV-2 3CLpro inhibitors: inspiration from SARS-CoV 3CLpro peptidomimetics and small-molecule anti-inflammatory compounds

J Zhu, H Zhang, Q Lin, J Lyu, L Lu, H Chen… - Drug design …, 2023 - Taylor & Francis
… process of COVID-19. Small-molecule compounds targeting … substrate map of SARS-CoV-2
3CL protease. Citation20 … insights into the study of drugs that target the SARS-CoV-2

[PDF][PDF] SARS-CoV-2 3CLpro Main Protease Drives Cytoskeletal Reorganization and Tunnelling Nanotube Formation for Stealth Intercellular Infection

C Overall, G Butler, M Vlok, H de Jesus, K Baid… - 2024 - researchgate.net
… Here, we expand the interactome and degradome of 3CLpro … 3 substrate targets of the
SARS-CoV-2 Nsp5-encoded 3CLpro … pathogenesis of COVID-19 and the therapeutic reduction of …

Deep profiling of potential substrate atlas of porcine epidemic diarrhea virus 3C-like protease

J Zhou, P Sun, Y Wang, R Qiu, Z Yang, J Guo… - Journal of …, 2024 - Am Soc Microbiol
… syndrome (MERS), and COVID-19, have posed a significant … in this study and those identified
in vitro SARS-CoV-2 3CL pro … pro substrate degradome, we categorized these proteins into

High-Resolution Substrate Specificity Profiling of SARS-CoV-2 Mpro; Comparison to SARS-CoV Mpro

RM Yaghi, CL Andrews, DC Wylie… - ACS Chemical …, 2024 - ACS Publications
… The SARS-CoV-2 M pro protease from COVID-19 cleaves the pp1a and pp2b polyproteins
… The information reported here has not only provided insight into the relative preferences for …

Potential resistance of SARS-CoV-2 main protease (Mpro) against protease inhibitors: lessons learned from HIV-1 protease

JA Mótyán, M Mahdi, G Hoffka, J Tőzsér - International journal of …, 2022 - mdpi.com
… Coronavirus disease 2019 (COVID-19), caused by the … Mpro is also referred to as 3-chymotrypsin-like
protease (3CLpro). … complexes, the substrate envelope of SARS-CoV-2 Mpro was …

Orthogonal dual reporter-based gain-of-signal assay for probing SARS-CoV-2 3CL protease activity in living cells: inhibitor identification and mutation investigation

ZC Bei, H Yu, H Wang, Q Li, B Wang… - Emerging Microbes & …, 2023 - Taylor & Francis
COVID-19 pandemic, 3CLpro has become the focus of numerous drug discovery efforts
worldwide. … the overall effect of 3CLpro-mediated broad host substrate cleavages on cells will be …

Repurposing of HIV/HCV protease inhibitors against SARS-CoV-2 3CLpro

L Ma, Q Li, Y Xie, D Yi, S Guo, F Guo, J Wang, L Yang… - Antiviral Research, 2022 - Elsevier
… 3CL pro is expressed in the cells, it will cleave its substrate to distance the pEYFP and Rluc
… to fully define the potential inhibitors for COVID-19 treatments, this work provides a robust …

Optimization of quenched fluorescent peptide substrates of SARS-CoV-2 3CLpro main protease (Mpro) from proteomic identification of P6—P6' active site specificity

H Cesar Ramos de Jesus, N Solis, Y Machado… - Journal of …, 2024 - Am Soc Microbiol
… 2019 (COVID-19) in the first documented coronavirus pandemic (1). With SARS-CoV-2 now
… The structural insights gleaned from global analysis of >800 cleavage sites identified by …