Ordination by resemblance matrices

L Orlóci - Ordination of plant communities, 1978 - Springer
… The ordination techniques, with which we are concerned in the present … matrix of resemblances.
These are measurements of similarity or dissimilarity between the entities to be ordinated

Matrix comparison, Part 2: Measuring the resemblance between proximity measures or ordination results by use of the Mantel and Procrustes statistics

JW Schneider, P Borlund - Journal of the American Society for …, 2007 - Wiley Online Library
… We emphasize that matrix comparison is a useful empirical … their potential influence upon
ordination and clustering results in … ordination of the two matrices to produce identical solutions. …

Matrix comparison, Part 1: Motivation and important issues for measuring the resemblance between proximity measures or ordination results

JW Schneider, P Borlund - Journal of the American Society for …, 2007 - Wiley Online Library
… and especially in relation to matrix comparison, or comparison of ordination results, the focus
… proximity matrices or ordination results are influenced by the way the comparable matrices

Comparison of ordination techniques

HG Gauch Jr, RH Whittaker - Ecology, 1972 - Wiley Online Library
… The resemblance functions are found to work from best to worst in the order: coefficient of …
Under a variety of situations, BrayCurtis ordination with a CD matrix performs best and …

From classical to canonical ordination

P Legendre, HJB Birks - … change using lake sediments: Data handling and …, 2012 - Springer
… If the ordination is to be obtained through a method requiring the prior calculation of a
distance matrix (PCoA, NMDS), resemblance coefficients are available that are capable of …

Ecological resemblance

P Legendre, L Legendre - Developments in environmental modelling, 2012 - Elsevier
… The methods of analysis to which the association matrix will be subjected (clustering,
ordination) may require measures of resemblance with specific mathematical properties. …

Ecologically meaningful transformations for ordination of species data

P Legendre, ED Gallagher - Oecologia, 2001 - Springer
… or three PCoA or NMDS ordination axes retained for ordination, together with the original …
Resemblance matrices cannot be used directly in canonical ordination, however. Legendre …

A comparative study of reciprocal averaging and other ordination techniques

HG Gauch Jr, RH Whittaker, TR Wentworth - the Journal of Ecology, 1977 - JSTOR
matrix BBT of Hill's (1973) Appendix 1, with prior centring to eliminate a trivial first eigenvector
(Orloci 1975), then reduce this cross products matrix … ?o, and resemble properties of field …

On choosing a resemblance measure for non-linear predictive ordination

PH Fewster, L Orlóci - Plant community ecology: Papers in honor of Robert …, 1985 - Springer
resemblance measures incorporated into a method of multi-dimensional scaling. The
results show that a resemblance … in ordination, if the standardizations have not been too 'severe'. …

Extending Gower's general coefficient of similarity to ordinal characters

J Podani - Taxon, 1999 - Wiley Online Library
… It works for methods which start from a resemblance matrix … in the input dissimilarity matrix,
these axes explain pretty … This agreement allows direct visual comparison of ordination scatter …