The effects of pulsed 130 GHz radiations on lipid membrane permeability were investigated by using cationic liposomes containing dipalmitoyl phosphatidylcholine (DPPC), cholesterol, and stearylamine. Carbonic anhydrase (CA) was loaded inside the liposomes and the substrate p‐nitrophenyl acetate (p‐NPA) added in the bulk aqueous phase. Upon permeation across the lipid bilayer, the trapped CA catalyzes the conversion of the p‐NPA molecules into products. Because the self‐diffusion rate of p‐NPA across intact liposomes is very low the CA reaction rate, expressed as ΔA/min, is used to track membrane permeability changes. The effect of 130 GHz radiation pulse‐modulated at low frequencies of 5, 7, or 10 Hz, and at time‐averaged incident intensity (I_AV) up to 17 mW/cm² was studied at room temperature (22 °C), below the phase transition temperature of DPPC liposomes. At all the tested values of I_AV a significant enhancement of the enzyme reaction rate in CA‐loaded liposomes occurred when the pulse repetition rate was 7 Hz. Typically, an increase from ΔA/min = 0.0026 ± 0.0010 (n = 11) to ΔA/min = 0.0045 ± 0.0013 (n = 12) (P < 0.0005) resulted at I_AV = 7.7 mW/cm². The effect of 130 GHz pulse‐modulated at 7 Hz was also observed on cationic liposomes formed with palmitoyloleoyl phosphatidylcholine (POPC), at room temperature (22 °C), above the phase transition temperature of POPC liposomes. Bioelectromagnetics 28:587–598, 2007. © 2007 Wiley‐Liss, Inc.