The Ascomycota tree of life: a phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits

CL Schoch, GH Sung, F López-Giráldez… - Systematic …, 2009 - academic.oup.com
… maximum-likelihood phylogeny of Ascomycota, the largest … on the 6-gene phylogeny we
conducted a phylogenetic … , ascus dehiscence, and evolution of nutritional modes and ecologies. …

Genome-scale phylogeny and contrasting modes of genome evolution in the fungal phylum Ascomycota

XX Shen, JL Steenwyk, AL LaBella, DA Opulente… - Science …, 2020 - science.org
phylogeny of the fungal phylum Ascomycota To infer a genome-scale phylogeny of the
Ascomycota, we used 1107 publicly available genomes from species belonging to Ascomycota (…

The fungal tree of life: from molecular systematics to genome‐scale phylogenies

JW Spatafora, MC Aime, IV Grigoriev… - The fungal …, 2017 - Wiley Online Library
phylogenies, along with standard molecular phylogenies, on our understanding of the evolution
of the fungal tree of lifeevolution of the ascomycetes, the synteny of the MAT loci across …

Phylogenetic taxon definitions for Fungi, Dikarya, Ascomycota and Basidiomycota

DS Hibbett, M Blackwell, TY James, JW Spatafora… - IMA fungus, 2018 - Springer
… It is hoped that the PTDs presented below will clarify and stabilize application of the names
Fungi, Dikarya, Ascomycota, and Basidiomycota, and provide a model for other mycologists …

Reconstructing the fungal tree of life using phylogenomics and a preliminary investigation of the distribution of yeast prion-like proteins in the fungal kingdom

EM Medina, GW Jones, DA Fitzpatrick - Journal of molecular evolution, 2011 - Springer
… Within the Ascomycota phylum, our phylogenies reconstruct monophyletic Saccharomycotina
and Pezizomycotina subphyla clades and infer a sister group relationship between these …

An overview of genomics, phylogenomics and proteomics approaches in Ascomycota

L Muggia, CG Ametrano, K Sterflinger, D Tesei - Life, 2020 - mdpi.com
ascomycetes and basidiomycetes forming distinct clusters, with each set of taxa having a
high coefficient of relatedness and forming distinct groups in a phylogenetic tree … to clarify

[PDF][PDF] Genome-level analyses resolve an ancient lineage of symbiotic ascomycetes

D Díaz-Escandón, G Tagirdzhanova, D Vanderpool… - Current Biology, 2022 - cell.com
… To test whether the recovered relationships were sensitive to phylogenetic reconstruction
methods, we compared the results of maximum likelihood analyses based on concatenated …

What an rRNA secondary structure tells about phylogeny of fungi in Ascomycota with emphasis on evolution of major types of ascus

WY Zhuang, CY Liu - PLoS One, 2012 - journals.plos.org
… made a great contribution to our understanding of Ascomycota phylogeny. However, filling
the gaps between molecular phylogeny and morphological assumptions based on ascus …

Dating the diversification of the major lineages of Ascomycota (Fungi)

M Prieto, M Wedin - PloS one, 2013 - journals.plos.org
… for calibrating phylogenetic trees. We have recently produced a phylogeny of the Ascomycota
with … This phylogeny contains representatives of several groups in which amber–preserved …