Phylogenetic lineages in the Capnodiales

PW Crous, CL Schoch, KD Hyde, AR Wood… - Studies in …, 2009 - ingentaconnect.com
… The designation of the epitype in the present study clarifies the phylogenetic position of
the genus, and reveals Catenulostroma s. str. to represent species that occur in extreme …

In silico characterization and molecular evolutionary analysis of a novel superfamily of fungal effector proteins

I Stergiopoulos, YAI Kourmpetis, JC Slot… - … and Evolution, 2012 - academic.oup.com
… and identify key events in the evolutionary history of the Hce2 superfamily, we … tree
phylogeny of Ascomycota that was constructed with reference to available published phylogenies. …

Mycology: Metagenomes illuminate evolutionary relationships and reframe symbiotic interactions

AE Arnold - Current Biology, 2022 - cell.com
… Frequent updates and adjustments to the fungal and Ascomycota trees of life over recent
years reflect not only important expansions in the taxonomic breadth of phylogenetic analyses, …

Taxon sampling and the optimal rates of evolution for phylogenetic inference

JP Townsend, C Leuenberger - Systematic Biology, 2011 - academic.oup.com
… Finally, we argue for the development of increasingly sophisticated tools for the prediction
of … The Ascomycota tree of life: a phylum-wide phylogeny clarifies the origin and evolution of …

[PDF][PDF] Evolution of lichens

HT Lumbsch, J Rikkinen - … community: Its organization and role in …, 2017 - helda.helsinki.fi
… and similar thallus anatomies have independently evolved in unrelated groups of ascomycetes.
Phylogenetic evidence for an animal pathogen origin of ergot and the grass endophytes. …

Pondering mating: Pneumocystis jirovecii, the human lung pathogen, selfs without mating type switching, in contrast to its close relative Schizosaccharomyces pombe

P Inderbitzin, BG Turgeon - MBio, 2015 - Am Soc Microbiol
… at the base of the ascomycete phylogenetic tree collectively known as the Taphrinomycotina
(7… The Ascomycota tree of life: a phylum-wide phylogeny clarifies the origin and evolution of …

Future perspectives and challenges of fungal systematics in the age of big data

Z Wang, RH Nilsson, TY James, Y Dai… - Biology of microfungi, 2016 - Springer
… inconsistency between the evolution of morphology and molecular phylogeny. When standard
… A more taxonomically complete six-gene dataset for 420 ascomycetes was subsequently …

Limited DNA repair gene repertoire in ascomycete yeast revealed by comparative genomics

S Milo, R Harari-Misgav… - … Biology and Evolution, 2019 - academic.oup.com
… (A) Phylogeny of the Ascomycete classes studied in this work. Blue … a phylogenetic outgroup.
(B) Orthologs of 90 DNA repair genes were identified in species from different Ascomycete

Genome evolution of plant-parasitic nematodes

T Kikuchi, S Eves-van den Akker… - Annual review of …, 2017 - annualreviews.org
Phylogenetic analyses of nematodes suggest that plant-parasitic nematodes have independently
evolved on at least … Figure 1 Schematic phylogeny of nematodes. Clades 1–12 are the …

Taxonomy of Pathogenic Yeasts Candida, Cryptococcus, Malassezia, and Trichosporon Current Status, Future Perspectives, and Proposal for Transfer of Six Candida Species …

M Takashima, T Sugita - Medical mycology journal, 2022 - jstage.jst.go.jp
… in Section 3, along with the history of name changes. Since the phylogenetic positions of
Candida species in several clades have not been clarified, revision of this species has not been …