Changes in microenvironment modulate the B-to A-DNA transition
… on the conformational free-energy characterizing B-to-A transition. From the investigation of
… changes in microenvironment around DNA are essential for regulating B-to-A DNA transition…
… changes in microenvironment around DNA are essential for regulating B-to-A DNA transition…
The tumor microenvironment and DNA repair
TJ Klein, PM Glazer - Seminars in radiation oncology, 2010 - Elsevier
… that reoxygenation acts as a DNA-damaging event. … a picture of the tumor microenvironment
as an environment that is … Because these changes occur at the level of transcription, they …
as an environment that is … Because these changes occur at the level of transcription, they …
Local chromatin microenvironment determines DNMT activity: from DNA methyltransferase to DNA demethylase or DNA dehydroxymethylase
… at the beginning of the transcription cycle to induce expression of pS2, … with transient local
changes in the microenvironment, as … as a DNA demethylase in the context of SAM deficiency. …
changes in the microenvironment, as … as a DNA demethylase in the context of SAM deficiency. …
New insights into the functions of nucleic acids controlled by cellular microenvironments
S Matsumoto, N Sugimoto - Topics in Current Chemistry, 2021 - Springer
… vast changes at … Transcription of a DNA template with a hairpin formation produced RNA
that was approximately 10 nt longer or shorter than full-length due to slippage in transcription…
that was approximately 10 nt longer or shorter than full-length due to slippage in transcription…
Multifaceted control of DNA repair pathways by the hypoxic tumor microenvironment
SE Scanlon, PM Glazer - DNA repair, 2015 - Elsevier
… of proteins that changed their chromatin association … transcription modulation, which likely
represent factors mediating epigenetic changes as well as those responding to the changes […
represent factors mediating epigenetic changes as well as those responding to the changes […
Essential role of DNA base excision repair on survival in an acidic tumor microenvironment
Y Seo, TJ Kinsella - Cancer research, 2009 - AACR
… transcription factors. Here, we show that inhibition of the BER pathway in an acidic tumor
microenvironment … For both the direct and indirect formation of SSBs, a DNA end processing …
microenvironment … For both the direct and indirect formation of SSBs, a DNA end processing …
A microenvironment‐sensitive fluorescent pyrimidine ribonucleoside analogue: synthesis, enzymatic incorporation, and fluorescence detection of a DNA abasic site
AA Tanpure, SG Srivatsan - Chemistry–A European Journal, 2011 - Wiley Online Library
… to changes in the microenvironment … vitro transcription reactions were conceived, as illustrated
in Figure 2. A series of promoter–template duplexes were assembled by annealing a DNA …
in Figure 2. A series of promoter–template duplexes were assembled by annealing a DNA …
DNA microenvironment monitored by controlling redox blinking
K Kawai, K Higashiguchi, A Maruyama… - …, 2015 - Wiley Online Library
… in the hairpin–duplex conformational transition, the observed … As a control, we also
synthesized a DNA molecular-beacon-… In summary, microenvironment changes around the …
synthesized a DNA molecular-beacon-… In summary, microenvironment changes around the …
Nitroxide sensing of a DNA microenvironment: Mechanistic insights from EPR spectroscopy and molecular dynamics simulations
AM Popova, MM Hatmal, MP Frushicheva… - The Journal of …, 2012 - ACS Publications
… a DNA sequence change, namely, the removal of a methyl group in the major groove of a
DNA … p labels are exploring a naturally occurring transition of the DNA backbone to establish (…
DNA … p labels are exploring a naturally occurring transition of the DNA backbone to establish (…
DNA damage-induced inflammatory microenvironment and adult stem cell response
… Importantly, this protein is not only a DNA sensor but it is itself an ISG, and the activation of
… biological mechanisms linked to changes in the stem cell microenvironment and activation of …
… biological mechanisms linked to changes in the stem cell microenvironment and activation of …
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- dna conformational transition
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