… We obtained robust and high-quality ChIP-seq profiles by all accepted modENCODE …
ChIP-seq profiles suggested co-localization of the two remodeling factors at the active promoter …

… be active enhancers … promoters are 2.4-fold enriched overall in p300-binding sites (P <
0.05, Fig. 5a). In total, 14% of all forebrain p300 peaks are located within 101 kb from a promoter …

… active promoters. Our results further suggest that ChIP-Seq may be an effective alternative
technique for genome-wide promoter mapping, complementing methods based on the 5′ tag …

… , which are then interpreted as chromatin states based on the chromatin profile and gene
annotations, such as active promoter/enhancer, transcriptional elongation or repressive states. …

… active developmental enhancers 16,17,18,19 . To obtain an initial genome-wide set of candidate
enhancer sequences active in the heart, we performed p300 ChIP-Seq … likely promoter …

… as a mark of active gene transcription. Tiwari et al. showed by genome-wide ChIP-seq
analysis that c-Jun NH2-terminal kinase (JNK) binds to a large set of active promoters during the …

… H3K4me3, associated with active promoters, is highly localized to a few nucleosomes
around promoter regions, probably deposited by complexes that directly interact with sequence …

… For example, H3K4me3 is usually associated with active promoters, and occurs only at
nucleosomes close to transcription start sites (TSSs). On the other hand, many histone …

… These loci show evidence of open chromatin and H3K4me1 but do not resemble active
promoters or enhancers. Analysis of the ChIP-seq data identified a set of three transcription …

… The association of Z-DNA with active transcription was … as sequence composition, and is
associated with active transcription in … Because many of our ZFSs were detected in the promoter …