Development of an efficient and precise adenine base editor (ABE) with expanded target range in allotetraploid cotton (Gossypium hirsutum)
… % efficiency on-target sites of the allotetraploid cotton genome. … Furthermore, DNA and RNA
off-target analysis of cotton … -target mutations, while very low-level RNA off-target mutations …
off-target analysis of cotton … -target mutations, while very low-level RNA off-target mutations …
Divergent improvement of two cultivated allotetraploid cotton species
… In order to assess the range of improvement and application value of interspecific haplotypes
or introgressions, we analysed the field performance of 229 Gb and 45 Gh cultivars or lines …
or introgressions, we analysed the field performance of 229 Gb and 45 Gh cultivars or lines …
Development and mapping of SNP assays in allotetraploid cotton
RL Byers, DB Harker, SM Yourstone… - Theoretical and Applied …, 2012 - Springer
… Genomes were further reduced by selecting genomic fragments from the PCR reaction in the
range … of SNP assays has targeted both genic and non-genic portions of the cotton genome. …
range … of SNP assays has targeted both genic and non-genic portions of the cotton genome. …
Genomic diversifications of five Gossypium allopolyploid species and their impact on cotton improvement
… landscapes and target genes for crop improvement. … and diversification, allotetraploid
cotton genomes retained the … The assembled genomes range in size from 2.2 to 2.3 gigabase …
cotton genomes retained the … The assembled genomes range in size from 2.2 to 2.3 gigabase …
Insights into the evolution of cotton diploids and polyploids from whole-genome re-sequencing
JT Page, MD Huynh, ZS Liechty, K Grupp… - G3: Genes …, 2013 - academic.oup.com
… Because we have made this a public resource, any researcher investigating cotton now
has homoeo-SNPs and allele-SNPs information for any target gene already identified. This …
has homoeo-SNPs and allele-SNPs information for any target gene already identified. This …
Gossypium barbadense and Gossypium hirsutum genomes provide insights into the origin and evolution of allotetraploid cotton
… Allotetraploid cotton is an economically important natural-fiber-producing crop worldwide. …
genomes for these two cultivated allotetraploid species with pronounced improvement in …
genomes for these two cultivated allotetraploid species with pronounced improvement in …
Development of chromosome-specific markers with high polymorphism for allotetraploid cotton based on genome-wide characterization of simple sequence repeats in …
C Lu, C Zou, Y Zhang, D Yu, H Cheng, P Jiang… - BMC genomics, 2015 - Springer
… Tetraploid cotton contains two sets of homologous chromosomes, the At- and Dt-subgenomes.
Consequently, many markers in cotton were mapped to multiple positions during linkage …
Consequently, many markers in cotton were mapped to multiple positions during linkage …
High‐efficient and precise base editing of C•G to T•A in the allotetraploid cotton (Gossypium hirsutum) genome using a modified CRISPR/Cas9 system
… and accuracy for the generation of targeted point mutations in allotetraploid cotton. … in
allotetraploid cotton, the endogenous GhCLA and GhPEBP genes were chosen as targets for base …
allotetraploid cotton, the endogenous GhCLA and GhPEBP genes were chosen as targets for base …
… analysis of extant cotton progenitors revealed tetraploidization and identified genome-specific single nucleotide polymorphism in diploid and allotetraploid cotton
… Gene expression studies in allotetraploid cotton are complicated by the homoeologous loci
of A- and D-genome origins. To develop genomic resources for gene expression and cotton …
of A- and D-genome origins. To develop genomic resources for gene expression and cotton …
Homoeolog expression bias and expression level dominance in allopolyploid cotton
… domestication has greatly altered the leaf transcriptome of cultivated cotton, even without
leaves being obvious, direct phenotypic targets. This selection may operate at the level of …
leaves being obvious, direct phenotypic targets. This selection may operate at the level of …
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