[PDF][PDF] An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG II

APG Ii - Botanical journal of the Linnean Society, 2003 - plantnetwork.org
During the 1990s, reconstruction of flowering plant phylogeny took a great step forward.
Rapidly accumulating DNA sequences, in particular from the plastid gene rbcL (eg Chase et al., …

Angiosperm phylogeny based on 18S/26S rDNA sequence data: constructing a large data set using next-generation sequence data

VH Maia, MA Gitzendanner, PS Soltis… - … Journal of Plant …, 2014 - journals.uchicago.edu
… framework of angiosperm phylogeny, this study does reveal that combined 18S + 26S gene
sequences do a good job in recovering what we now believe is the angiosperm backbone …

Phylogeny of seed plants based on evidence from eight genes

DE Soltis, PS Soltis, MJ Zanis - American Journal of Botany, 2002 - Wiley Online Library
… constructed a data set containing sequences from four cpDNA genes (rbcL, atpB, psaA, and
… All major groups of seed plants are represented, and the total aligned sequence per taxon …

Sequencing angiosperm plastid genomes made easy: a complete set of universal primers and a case study on the phylogeny of Saxifragales

W Dong, C Xu, T Cheng, K Lin… - Genome biology and …, 2013 - academic.oup.com
… To test the phylogenetic efficiency of this method, we amplified and sequenced 18 … taxa, as
a case study, to reconstruct the phylogeny of all families of the order. Phylograms based on a …

Phylogeny reconstruction and functional constraints in organellar genomes: plastid atpB and rbcL sequences versus animal mitochondrion

V Savolainen, MW Chase, N Salamin, DE Soltis… - Systematic biology, 2002 - JSTOR
… properties of plastid rbcL and atpB sequences. This was done assuming a phylogenetic tree
previously reconstructed for concatenated plastid (rbcL and atpB) and nuclear 18S rDNA se…

An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG III

Angiosperm Phylogeny Group - Botanical Journal of the …, 2009 - academic.oup.com
… A few genera/families, members of which had either not been sequenced before or for
which chimaeric sequences were produced, were wrongly placed. Thus, families like …

An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG IV

Angiosperm Phylogeny Group… - Botanical journal of …, 2016 - academic.oup.com
… -plastid genome sequencing and nuclear gene sequencing should remedy this situation,
as it has done for the early-diverging lamiids. Of course, new phylogenetic understanding may …

Inferring complex phylogenies using parsimony: an empirical approach using three large DNA data sets for angiosperms

DE Soltis, PS Soltis, ME Mort, MW Chase… - Systematic …, 1998 - academic.oup.com
… 190 angiosperms and three outgroups. Separate data sets of 18S rDNA (1,855 bp), rbcL (1,428
bp), and atpB (1,450 bp) sequences … rbcL DNA sequences to angiosperm phylogenetics. …

Molecular phylogenetics of Phyllanthaceae inferred from five genes (plastid atpB, matK, 3′ ndhF, rbcL, and nuclear PHYC)

H Kathriarachchi, P Hoffmann, R Samuel… - Molecular Phylogenetics …, 2005 - Elsevier
… A phylogenetic study of the family using DNA sequence data has delivered largely
congruent results from the plastid atpB, matK, ndhF, rbcL, and the nuclear PHYC. Our analyses …

Molecular phylogeny ofNothofagus (Nothofagaceae) based on theatpB-rbcL intergenic spacer of the chloroplast DNA

H Setoguchi, M Ono, Y Doi, H Koyama… - Journal of Plant …, 1997 - Springer
… The atpB-rbcL intergenic spacer used in the phylogenetic reconstTuction of Nothofagus in
… this study and GenBank accession numbers for the atpB-rbcL intergenic spacer sequences