Target-AMP: Computational prediction of antimicrobial peptides by coupling sequential information with evolutionary profile
… The training dataset consisted of 3175 peptide sequences, of which 770 are antimicrobial
peptides and 2405 are non-antimicrobial peptides. On the other hand, 1840 peptides in the …
peptides and 2405 are non-antimicrobial peptides. On the other hand, 1840 peptides in the …
Detecting antimicrobial peptides by exploring the mutual information of their sequences
V Tripathi, P Tripathi - Journal of Biomolecular Structure and …, 2020 - Taylor & Francis
… The results obtained in this study indicate that the mutual information of a peptide sequence
can be an efficient feature tool for predicting the AMPs. In particular, the MIV method takes …
can be an efficient feature tool for predicting the AMPs. In particular, the MIV method takes …
Prediction of antimicrobial peptides based on sequence alignment and feature selection methods
… are rich in antimicrobial peptides (Figure … antimicrobial and non-antimicrobial peptides. Our
results further confirm that amino acid composition is important for identify whether a peptide …
results further confirm that amino acid composition is important for identify whether a peptide …
[PDF][PDF] Identification of Antimicrobial Peptides Using Chou's 5 Step Rule.
SJ Malebary, YD Khan - Computers, Materials & Continua, 2021 - cdn.techscience.cn
… While doing this frequency matrix completely disregards the protein sequence information.
Accumulative absolute position incidence vector (AAPIV) describes the absolute position of …
Accumulative absolute position incidence vector (AAPIV) describes the absolute position of …
CAMP: a useful resource for research on antimicrobial peptides
… understanding on antimicrobial peptides. It is manually curated and currently holds 3782
antimicrobial sequences… Sequence changes may not always render the peptide completely non-…
antimicrobial sequences… Sequence changes may not always render the peptide completely non-…
Sequence requirements and an optimization strategy for short antimicrobial peptides
K Hilpert, MR Elliott, R Volkmer-Engert, P Henklein… - Chemistry & biology, 2006 - cell.com
… In this paper, we have applied this newly developed method to increase understanding
of the primary sequence requirements for short antimicrobial peptides (12 amino acids) in …
of the primary sequence requirements for short antimicrobial peptides (12 amino acids) in …
The value of antimicrobial peptides in the age of resistance
M Magana, M Pushpanathan, AL Santos… - The lancet infectious …, 2020 - thelancet.com
… antimicrobial peptides as novel therapeutics. This Review identifies the benefits, challenges,
and opportunities of using antimicrobial peptides … of novel promising antimicrobial peptides, …
and opportunities of using antimicrobial peptides … of novel promising antimicrobial peptides, …
AmPEP: Sequence-based prediction of antimicrobial peptides using distribution patterns of amino acid properties and random forest
… Antimicrobial peptides (AMPs) are promising candidates in the fight against multidrug-…
patterns of amino acid properties along the sequence. Using our collection of large and diverse …
patterns of amino acid properties along the sequence. Using our collection of large and diverse …
Characterization and identification of antimicrobial peptides with different functional activities
… On this basis, we specifically investigated the sequence features of AMPs with a range of …
Sequential forward selection was employed to extract potentially informative features that …
Sequential forward selection was employed to extract potentially informative features that …
Synthetic molecular evolution of antimicrobial peptides
… how peptide structure and activity are related, we anticipate that antimicrobial peptides will
be engineered to have strong potency and distinct functions and that synthetic peptides will …
be engineered to have strong potency and distinct functions and that synthetic peptides will …
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