[HTML][HTML] Current status and challenges of DNA base editing tools
… base editor shortcomings, including off-target DNA editing, … , which arise from the main DNA
base editor constituents, a Cas … The activity of ABE7.10 was further enhanced by addition of …
base editor constituents, a Cas … The activity of ABE7.10 was further enhanced by addition of …
Base editing: precision chemistry on the genome and transcriptome of living cells
… base is located within the base editor activity window relative to the protospacer adjacent
motif (PAM) site; there is only one target base in the activity window, and the target base … base …
motif (PAM) site; there is only one target base in the activity window, and the target base … base …
Base editing: advances and therapeutic opportunities
EM Porto, AC Komor, IM Slaymaker… - Nature Reviews Drug …, 2020 - nature.com
… b | Activity windows of base editors with the basic architecture from part a with the indicated
Cas … Base editor activity windows are shown over the 20-nucleotide protospacer sequence (…
Cas … Base editor activity windows are shown over the 20-nucleotide protospacer sequence (…
GO: a functional reporter system to identify and enrich base editing activity
… activity in living cells. We show that GO can be used to directly and quantitatively compare the
efficiency, off-target activity… streamline the application of base editing activity in primary and …
efficiency, off-target activity… streamline the application of base editing activity in primary and …
Engineered CRISPR–Cas12a variants with increased activities and improved targeting ranges for gene, epigenetic and base editing
… Base editors (BEs) consist of cytosine deaminases and uracil … activities of enAsCas12a
could enable efficient base editing, we compared four different denAsCas12a base-editor fusions …
could enable efficient base editing, we compared four different denAsCas12a base-editor fusions …
[HTML][HTML] Determinants of base editing outcomes from target library analysis and machine learning
… Although base editors are widely used to install … base editing outcomes are not well
understood. We characterized sequence-activity relationships of 11 cytosine and adenine base …
understood. We characterized sequence-activity relationships of 11 cytosine and adenine base …
High-purity production and precise editing of DNA base editing ribonucleoproteins
… We next investigated whether we could discriminate the editing activity windows and editing
patterns induced by ABE/CBE RNPs and by plasmid-encoded ABE/CBEs. An analysis of the …
patterns induced by ABE/CBE RNPs and by plasmid-encoded ABE/CBEs. An analysis of the …
Programmable A-to-Y base editing by fusing an adenine base editor with an N-methylpurine DNA glycosylase
H Tong, X Wang, Y Liu, N Liu, Y Li, J Luo, Q Ma… - Nature …, 2023 - nature.com
… base editor, AYBE, for A-to-C and A-to-T transversion editing in mammalian cells by fusing
an adenine base editor (ABE) … editing activity and product purity of AYBE to obtain an A-to-C …
an adenine base editor (ABE) … editing activity and product purity of AYBE to obtain an A-to-C …
Off-target RNA mutation induced by DNA base editing and its elimination by mutagenesis
… we examined the editing activities by catalytic inactivation of only the wild-type monomer (via
an F148A mutation), and found that this variant maintained DNA on-target activity but could …
an F148A mutation), and found that this variant maintained DNA on-target activity but could …
[HTML][HTML] Engineering of near-PAMless adenine base editor with enhanced editing activity and reduced off-target
X Cao, J Guo, S Huang, W Yu, G Li, L An, X Li… - … Therapy-Nucleic Acids, 2022 - cell.com
… editing efficiency, limited editing scopes, and off-targeting effects. Here, we develop a new
adenine base editor… -8e-SpRY, which exhibits higher activity at NRN than NYN PAMs favored …
adenine base editor… -8e-SpRY, which exhibits higher activity at NRN than NYN PAMs favored …