Unraveling capsule biosynthesis and signaling networks in Cryptococcus neoformans

EH Jang, JS Kim, SR Yu, YS Bahn - Microbiology spectrum, 2022 - Am Soc Microbiol
… However, the complex signaling networkscapsule biosynthesis and signaling networks
using C. neoformans transcription factor (TF) and kinase mutant libraries under diverse capsule-…

Coordination of capsule assembly and cell wall biosynthesis in Staphylococcus aureus

M Rausch, JP Deisinger, H Ulm, A Müller, W Li… - Nature …, 2019 - nature.com
… acid sequences of cap5 operon gene products allowed for the prediction of individual
enzymatic functions and the proposal of a pathway for capsule (CP) biosynthesis in S. aureus 18 . …

Cryptococcus neoformans capsule biosynthesis and regulation

G Janbon - FEMS yeast research, 2004 - academic.oup.com
… Until recently, knowledge of the capsule biosynthetic pathways has been very fragmented,
even … recent developments in our knowledge of capsule biosynthesis. 2 Capsule biochemistry …

Unraveling synthesis of the cryptococcal cell wall and capsule

ZA Wang, LX Li, TL Doering - Glycobiology, 2018 - academic.oup.com
… Defining the order of the synthetic events that generate GXM and GXMGal will require further
identification and elucidation of capsule biosynthetic machinery. Some hints as to reaction …

[HTML][HTML] Networks of fibers and factors: regulation of capsule formation in Cryptococcus neoformans

H Ding, FL Mayer, E Sánchez-León… - …, 2016 - pmc.ncbi.nlm.nih.gov
network of transcription factors that influence capsule elaboration in response to several
different signals of … The emerging complexity of the network is consistent with the diversity of …

Biosynthesis and Assembly of Capsular Polysaccharides in Escherichia coli

C Whitfield - Annu. Rev. Biochem., 2006 - annualreviews.org
capsular polysaccharides is illustrated by almost 80 capsular … of strategies used for capsule
biosynthesis and assembly is … it is proposed that biosynthesis and translocation of capsular

Coordinate regulation of glycan degradation and polysaccharide capsule biosynthesis by a prominent human gut symbiont

EC Martens, R Roth, JE Heuser, JI Gordon - Journal of Biological Chemistry, 2009 - ASBMB
… into new polymers such as extracellular capsules. The human gut bacterium Bacteroides …
eight different gene clusters for capsular polysaccharide biosynthesis. Here, we investigate …

Unraveling melanin biosynthesis and signaling networks in Cryptococcus neoformans

D Lee, EH Jang, M Lee, SW Kim, Y Lee, KT Lee… - MBio, 2019 - Am Soc Microbiol
… neoformans TFs demonstrated that Bzp4 plays positive roles in both melanin and
capsule biosynthesis but is not required for virulence (43). Interestingly, a recent genome-wide …

The Capsule Regulatory Network of Klebsiella pneumoniae Defined by density-TraDISort

MJ Dorman, T Feltwell, DA Goulding, J Parkhill… - MBio, 2018 - Am Soc Microbiol
… pneumoniae capsule biosynthesis is achieved or regulated … and positive regulators of
capsule biosynthesis (6, 19… More than 100 capsule locus types have been identified in K. …

An interpretable deep-learning architecture of capsule networks for identifying cell-type gene expression programs from single-cell RNA-sequencing data

L Wang, R Nie, Z Yu, R Xin, C Zheng, Z Zhang… - Nature Machine …, 2020 - nature.com
… Here we propose an interpretable deep-learning architecture using capsule networks (called
scCapsNet). A capsule structure (a neuron vector representing a set of properties of a …