Identify, quantify and characterize cellular communication from single-cell RNA sequencing data with scSeqComm
G Baruzzo, G Cesaro, B Di Camillo - Bioinformatics, 2022 - academic.oup.com
… cellular communication from scRNA-seq data. Genes associated with the detected effect of
cellular communication are … the effect of cell–cell communication through an integrated Gene …
cellular communication are … the effect of cell–cell communication through an integrated Gene …
[HTML][HTML] A review of single-cell RNA-Seq annotation, integration, and cell–cell communication
… using bulk RNA sequencing may not accurately capture the cellular heterogeneity and
complexity of cell interactions. Single-cell RNAseq based cell–cell communication analysis (…
complexity of cell interactions. Single-cell RNAseq based cell–cell communication analysis (…
[HTML][HTML] Comparison of methods and resources for cell-cell communication inference from single-cell RNA-Seq data
… Single-cell RNA sequencing (scRNA-Seq) data has become a driving force in the analysis
of the cellular heterogeneity of tissues. Furthermore, Spatial Transcriptomics has recently …
of the cellular heterogeneity of tissues. Furthermore, Spatial Transcriptomics has recently …
[HTML][HTML] Analysis of single-cell RNA-seq identifies cell-cell communication associated with tumor characteristics
… the cellular composition of a tumor, it is crucial to understand how the different cellular …
using both bulk and single-cell sequencing data to examine cell-cell communication exist ( …
using both bulk and single-cell sequencing data to examine cell-cell communication exist ( …
scConnect: a method for exploratory analysis of cell–cell communication based on single-cell RNA-sequencing data
Motivation Cell to cell communication is critical for all multicellular organisms, and single-cell
sequencing facilitates the construction of full connectivity graphs between cell types in …
sequencing facilitates the construction of full connectivity graphs between cell types in …
CellCommuNet: an atlas of cell–cell communication networks from single-cell RNA sequencing of human and mouse tissues in normal and disease states
Q Ma, Q Li, X Zheng, J Pan - Nucleic Acids Research, 2024 - academic.oup.com
CellCommuNet: an atlas of cell–cell communication networks from single-cell RNA
sequencing of human and mouse tissues Page 1 Nucleic Acids Research, 2024, 52, D597–…
sequencing of human and mouse tissues Page 1 Nucleic Acids Research, 2024, 52, D597–…
Single-cell RNA-seq reveals dynamic paracrine control of cellular variation
… Here we sequence single-cell RNA-seq libraries prepared from over 1,700 primary mouse
… of cells detectably expressing a given messenger RNA and the transcript’s level within …
… of cells detectably expressing a given messenger RNA and the transcript’s level within …
[HTML][HTML] Comprehensive analysis of potential cellular communication networks in advanced osteosarcoma using single-cell RNA sequencing data
N Xu, X Wang, L Wang, Y Song, X Zheng… - Frontiers in Genetics, 2022 - frontiersin.org
… In this paper, a single-cell RNA sequencing dataset was taken to a systematic genetic … The
results of Cell communication analysis showed 17 potential cellular communication networks …
results of Cell communication analysis showed 17 potential cellular communication networks …
[HTML][HTML] Single‐cell RNA sequencing in cancer research
Y Zhang, D Wang, M Peng, L Tang, J Ouyang… - Journal of Experimental …, 2021 - Springer
… , that is, the cellular characteristics resulting in the … cellular communication mechanisms,
which increase the complexity of tumor development. Understanding these communication …
which increase the complexity of tumor development. Understanding these communication …
[HTML][HTML] Single-cell RNA-Seq reveals heterogeneity of cell communications between Schwann cells and fibroblasts within vestibular schwannoma microenvironment
M Xu, S Wang, Y Jiang, J Wang, Y Xiong… - The American Journal of …, 2022 - Elsevier
… shown to determine the heterogeneity of cellular communication in different individuals.
These findings suggest a microenvironmental mechanism underlying the development of VS. …
These findings suggest a microenvironmental mechanism underlying the development of VS. …
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