A systematic survey of centrality measures for protein-protein interaction networks
M Ashtiani, A Salehzadeh-Yazdi… - BMC systems …, 2018 - Springer
… measures. To approach this problem systematically, we … the centrality profile of nodes of
yeast protein-protein interaction networks (PPINs) in order to detect which centrality measure is …
yeast protein-protein interaction networks (PPINs) in order to detect which centrality measure is …
Centrality measure analysis on protein interaction networks
… Centrality identifies the relevance of node or edge in the network. Concerning the PPI
network, we apply centrality measures to detect the influential node. The identification of the hub …
network, we apply centrality measures to detect the influential node. The identification of the hub …
Centrality measures in residue interaction networks to highlight amino acids in protein–protein binding
G Brysbaert, MF Lensink - Frontiers in Bioinformatics, 2021 - frontiersin.org
… the capability of centrality measures to highlight residues that are essential for the binding
of two proteins on a large set, and second, we compare these measures to show which ones …
of two proteins on a large set, and second, we compare these measures to show which ones …
Novel centrality metrics for studying essentiality in protein‐protein interaction networks based on group structures
S Rasti, C Vogiatzis - Networks, 2022 - Wiley Online Library
… In this work, we introduce centrality metrics based on group … in protein-protein interaction
networks (PPINs). The … a monotone betweenness centrality measure with a larger betweenness …
networks (PPINs). The … a monotone betweenness centrality measure with a larger betweenness …
[PDF][PDF] Selection of most relevant centrality measures: A systematic survey on protein-protein interaction networks
M Ashtiani, A Salehzadeh-Yazdi… - bioRxiv, 2017 - biorxiv.org
… measures. To approach this problem systematically, we … the centrality profile of nodes of
yeast protein-protein interaction networks (PPINs) in order to detect which centrality measure is …
yeast protein-protein interaction networks (PPINs) in order to detect which centrality measure is …
Position matters: network centrality considerably impacts rates of protein evolution in the human protein–protein interaction network
D Alvarez-Ponce, F Feyertag… - Genome biology and …, 2017 - academic.oup.com
… network centrality (measured as the number of physical and nonphysical interactions,
betweenness, … 2,429 in yeast, 3,880 in fly, and 11,593 in human), and our centrality measures are …
betweenness, … 2,429 in yeast, 3,880 in fly, and 11,593 in human), and our centrality measures are …
Identification of essential proteins from weighted protein–protein interaction networks
… Nine standard centrality measures in weighted network were redened in … protein interaction
network shows that the weighting method improved the performance of centrality measures …
network shows that the weighting method improved the performance of centrality measures …
DiffSLC: A graph centrality method to detect essential proteins of a protein-protein interaction network
D Mistry, RP Wise, JA Dickerson - PloS one, 2017 - journals.plos.org
… calculations, the variety of centrality measures compared in this study, and the edge clustering
coefficient defined by [22]. The proposed DiffSLC is also defined at the end of the section. …
coefficient defined by [22]. The proposed DiffSLC is also defined at the end of the section. …
[HTML][HTML] Comparison of path-based centrality measures in protein-protein interaction networks revealed proteins with phenotypic relevance during adaptation to …
M Gilbert, Z Li, XN Wu, L Rohr, S Gombos, K Harter… - Journal of …, 2021 - Elsevier
… centrality measures to describe dynamic rewiring of cellular protein-protein interaction networks
in … We expect the use of path-based centrality measures to be a powerful strategy also in …
in … We expect the use of path-based centrality measures to be a powerful strategy also in …
A new essential protein discovery method based on the integration of protein-protein interaction and gene expression data
… on the integration of protein-protein interaction and gene … based on the protein-protein
interaction network of Saccharomyces … centrality measures: Degree Centrality (DC), Betweenness …
interaction network of Saccharomyces … centrality measures: Degree Centrality (DC), Betweenness …
相关搜索
- protein protein interaction networks systematic survey
- protein protein interaction networks centrality metrics
- human protein protein interaction network
- protein protein interaction networks phenotypic relevance
- protein protein interaction networks clustering coefficients
- protein protein interaction networks markov model
- measure analysis protein interaction networks
- virtual identification protein interaction network
- simple dependence protein protein interactions
- cytoscape plugin protein interaction networks
- rank robustness protein interaction networks
- induced stars protein interaction networks
- comparison review protein interaction networks
- protein protein interaction gene expression
- centrality measures residue interaction networks
- centrality measures in complex networks