Mutational dynamics and phylogenetic utility of noncoding chloroplast DNA

T Borsch, D Quandt - Plant systematics and evolution, 2009 - Springer
… proportion of the chloroplast genome as phylogenetic … last decade that deals with chloroplast
introns and spacers, and … evolution and phylogenetic utility of noncoding chloroplast DNA. …

The complete chloroplast genome sequence of Eugenia klotzschiana O. Berg unveils the evolutionary dynamics in plastomes of Myrteae DC. tribe (Myrtaceae)

LR Carvalho, R Nunes, MB Sobreiro, RO Dias… - Gene, 2023 - Elsevier
… Our results illuminate how evolution shaped the chloroplast genomechloroplast genome
of E. klotzschiana, in addition to using these data to study the evolution of chloroplast genomes

Phylogenomic and evolutionary dynamics of inverted repeats across Angelica plastomes

M Wang, X Wang, J Sun, Y Wang, Y Ge, W Dong… - BMC plant biology, 2021 - Springer
… In this study, we sequenced 28 chloroplast genomes of … genomes with five other published
chloroplast genomes of the same genus available from GenBank. The chloroplast genomes of …

Evolution of Oryza chloroplast genomes promoted adaptation to diverse ecological habitats

LZ Gao, YL Liu, D Zhang, W Li, J Gao, Y Liu… - Communications …, 2019 - nature.com
… -wide identified structural variants, and such a comprehensive map of genomicchloroplast
genomes during recent speciation. Specifically, we investigated the evolutionary dynamics of …

Molecular evolution of chloroplast genomes in Monsteroideae (Araceae)

CL Henriquez, Abdullah, I Ahmed, MM Carlsen… - Planta, 2020 - Springer
… Here, we report annotated chloroplast genome sequences of four … chloroplast genomes
will be helpful in understanding the evolutionary dynamics and in the elucidation of chloroplast

Rates and patterns of chloroplast DNA evolution.

MT Clegg, BS Gaut, GH Learn Jr… - Proceedings of the …, 1994 - National Acad Sciences
genome is smail and constitutes an abundant component ofcellular DNA. Second, the chloroplast
genome … the basic information to support comparative evolutionary research. And third, …

Dynamics and evolution of the inverted repeat-large single copy junctions in the chloroplast genomes of monocots

RJ Wang, CL Cheng, CC Chang, CL Wu, TM Su… - BMC evolutionary …, 2008 - Springer
… of inverted repeats (IRs) in chloroplast genomes led to fluxes in the IR-… genes flanking
two IR-LSC junctions in 123 angiosperm representatives to uncover the evolutionary dynamics

Sequencing of chloroplast genomes from wheat, barley, rye and their relatives provides a detailed insight into the evolution of the Triticeae tribe

CP Middleton, N Senerchia, N Stein, ED Akhunov… - PloS one, 2014 - journals.plos.org
chloroplast genome segment was copied from the chloroplast genome and inserted into the
nuclear genome … subsequently degraded from the chloroplast organellar genome sequence. …

Comparative chloroplast genomes: insights into the evolution of the chloroplast genome of Camellia sinensis and the phylogeny of Camellia

L Li, Y Hu, M He, B Zhang, W Wu, P Cai, D Huo… - BMC genomics, 2021 - Springer
… Through comparative analysis, we explored the evolutionary dynamics of cp genome and
the effects of polyploidization in C. sinensis. Furthermore, the phylogenetic analysis and the …

Evolutionary dynamics of duplicated genes in plants

A Lawton-Rauh - Molecular phylogenetics and evolution, 2003 - Elsevier
… and genome-wide aspects of evolutionary forces shaping intra- and interspecific genome
contents, evolutionary … on the molecular and evolutionary dynamics occurring at three different …