Molecular evolution of chloroplast genomes in subfamily Zingiberoideae (Zingiberaceae)

DM Li, J Li, DR Wang, YC Xu, GF Zhu - BMC Plant Biology, 2021 - Springer
… on ten complete Zingiberoideae chloroplast genomes, representing a valuable resource
for future studies that seek to understand the molecular evolutionary dynamics in family …

Six newly sequenced chloroplast genomes from trentepohliales: the inflated genomes, alternative genetic code and dynamic evolution

J Fang, B Liu, G Liu, H Verbruggen, H Zhu - Frontiers in Plant Science, 2021 - frontiersin.org
… first whole chloroplast genome of the genus Cephaleuros and enrich the chloroplast genome
… The goal of this study is to address this shortfall in chloroplast genome information in the …

Adaptive evolution of chloroplast genome structure inferred using a parametric bootstrap approach

L Cui, J Leebens-Mack, LS Wang, J Tang… - BMC evolutionary …, 2006 - Springer
… all available chlorophyte chloroplast genomes for evolutionary distance estimation and …
in chloroplast genome evolution [27], and our estimation of ancestral genome order was made …

Analysis of complete chloroplast genomes of Curcuma and the contribution to phylogeny and adaptive evolution

L Gui, S Jiang, D Xie, L Yu, Y Huang, Z Zhang, Y Liu - Gene, 2020 - Elsevier
… phylogeny and the genetic bases of adaptative evolution. In this work, we sequenced the
complete chloroplast genome of 4 Curcuma species. Curcuma chloroplast genomes showed …

Evolutionary dynamics of extranuclear genes

N Takahata, M Slatkin - Genetics Research, 1983 - cambridge.org
… of mitochondria in multicellular animals and the genes of mitochondria and chloroplasts in …
a loss of function of extranuclear genes, yet mitochondrial and chloroplast genes have clearly …

Insights into the phylogeny and chloroplast genome evolution of Eriocaulon (Eriocaulaceae)

E Li, K Liu, R Deng, Y Gao, X Liu, W Dong, Z Zhang - BMC Plant Biology, 2023 - Springer
… using the complete chloroplast genome. Furthermore, comparative analyses of the chloroplast
genomes were performed to investigate the chloroplast genome evolution of Eriocaulon. …

Large diversity of nonstandard genes and dynamic evolution of chloroplast genomes in siphonous green algae (Bryopsidales, Chlorophyta)

MCM Cremen, F Leliaert, VR Marcelino… - … and Evolution, 2018 - academic.oup.com
evolutionary dynamics of the chloroplast genome in siphonous green algae. We present five
new chloroplast genomes, … Besides characterizing the chloroplast genomes, we investigate …

The dynamic history of plastid genomes in the Campanulaceae sensu lato is unique among angiosperms

EB Knox - Proceedings of the National Academy of …, 2014 - National Acad Sciences
… The plastid genome in some groups of plants subsequently became dynamic, which prompts
… This study shows that the extensive rearrangements in Campanulaceae plastid genomes

Chloroplast genomes of five Oedogonium species: genome structure, phylogenetic analysis and adaptive evolution

Q Xiong, Y Hu, W Lv, Q Wang, G Liu, Z Hu - BMC genomics, 2021 - Springer
… and evolutionary problems of this order. This study determined five chloroplast (cp) genomes
of Oedogonium species and aimed to provide further information on cp genome for a better …

Evolutionary directions of single nucleotide substitutions and structural mutations in the chloroplast genomes of the family Calycanthaceae

W Dong, C Xu, J Wen, S Zhou - BMC Evolutionary Biology, 2020 - Springer
… rates, which are the key topics in chloroplast genome evolution. In this study, we used …
chloroplast genome evolution events provide raw data for correctly modeling the evolution