[HTML][HTML] Chloroplast biotechnology, genomics and evolution: current status, challenges and future directions

JL Clarke, H Daniell, JM Nugent - Plant molecular biology, 2011 - Springer
… to focus on the chloroplast genomes of crop species… chloroplast biology and genome
evolution has been immense. Studies in non-crop species have revealed the range of evolutionary

[HTML][HTML] Recent advances in the study of chloroplast gene expression and its evolution

Y Yagi, T Shiina - Frontiers in plant science, 2014 - frontiersin.org
… However, the genes encoded in chloroplast genomes are insufficient to regulate their
complicated gene expression, and so the chloroplast gene expression machinery includes various …

[HTML][HTML] Chloroplast genome evolution in four montane Zingiberaceae taxa in China

Q Yang, GF Fu, ZQ Wu, L Li, JL Zhao… - Frontiers in Plant Science, 2022 - frontiersin.org
… using the chloroplast genome (whole genome or protein-coding … sequenced chloroplast
genomes, other chloroplast genomes … In total, 47 chloroplast genomes and 54 ITS sequences, …

[PDF][PDF] Chloroplast phylogenomics and the dynamic evolution of Santalum (Santalaceae)

X Liu, D Xu, Z Hong, N Zhang, Z Cui - 2021 - scholar.archive.org
… Here, we sequenced the chloroplast genome of 11 Santalum species. The data were then
used to investigate the chloroplast genome evolutionary dynamics and relationships and …

[HTML][HTML] Adaptive evolution and co-evolution of chloroplast genomes in Pteridaceae species occupying different habitats: overlapping residues are always highly …

X Gu, L Li, S Li, W Shi, X Zhong, Y Su, T Wang - BMC Plant Biology, 2023 - Springer
… the molecular level, along with their co-evolutionary dynamics, can shed light on the
evolutionary pattern of species as well as the complex co-adaptation between residues in proteins. …

The evolutionary fate of the chloroplast and nuclear rps16 genes as revealed through the sequencing and comparative analyses of four novel legume chloroplast genomes from …

J Keller, M Rousseau-Gueutin, GE Martin… - Dna …, 2017 - academic.oup.com
… lupine chloroplast genomes were sequenced, assembled and analysed at different levels.
This study provides novel insights into the chloroplast genome evolutionary dynamics in the …

Gene duplication, transfer, and evolution in the chloroplast genome

AS Xiong, RH Peng, J Zhuang, F Gao, B Zhu… - Biotechnology …, 2009 - Elsevier
… flanking two IR-LSC (Inverted-Repeats-Large-Single-Copy) junctions in 123 angiosperm
representatives to uncover the evolutionary dynamics of IR-LSC junctions in basal …

ChloroplastDB: the chloroplast genome database

L Cui, N Veeraraghavan, A Richter, K Wall… - Nucleic acids …, 2006 - academic.oup.com
… Over the next few years, as the number of sequenced chloroplast genomes increases rapidly,
the … and compile target data for comparative analysis of chloroplast genes and genomes. …

[HTML][HTML] The Complete Chloroplast and Mitochondrial Genome Sequences of Boea hygrometrica: Insights into the Evolution of Plant Organellar Genomes

T Zhang, Y Fang, X Wang, X Deng, X Zhang, S Hu… - PLoS …, 2012 - journals.plos.org
… cp genome during recent Bh evolution. We also analyzed organellar genome evolution in
general regarding genome features as well as compositional dynamics of sequence and gene …

[HTML][HTML] … Analysis of the Chloroplast Genomes of the Chinese Endemic Genus Urophysa and Their Contribution to Chloroplast Phylogeny and Adaptive Evolution

DF Xie, Y Yu, YQ Deng, J Li, HY Liu, SD Zhou… - International journal of …, 2018 - mdpi.com
… Especially, the low evolutionary rate of the cp genome in taxa that are not very young makes
… In the present study, we report the complete chloroplast genome sequences of these two …