Clinical RNA sequencing in oncology: where are we?

G Pedersen, T Kanigan - Personalized Medicine, 2016 - Taylor & Francis
… a clinically applicable method for RNA sequencing called OneRNA™. The authors have
no other relevant affiliations or financial involvement with any organization or entity with a …

Uncovering the complexity of transcriptomes with RNASeq

V Costa, C Angelini, I De Feis… - BioMed Research …, 2010 - Wiley Online Library
… for DNA‐proteins interaction, CNV‐Seq for large genome … applications supported by these
innovative platforms. Among them RNASeq is perhaps the most complex NGS application. …

Evaluation and application of RNA-Seq by MinION

M Seki, E Katsumata, A Suzuki… - DNA …, 2019 - academic.oup.com
… -length cDNA sequencing using the Nanopore sequencer MinION. We applied MinION
RNA-Seq for various applications, which would not always be easy using the usual RNA-Seq by …

Alternative applications for distinct RNA sequencing strategies

L Han, KC Vickers, DC Samuels… - Briefings in …, 2015 - academic.oup.com
… Recent advances in RNA library preparation methods, platform accessibility and cost
efficiency have allowed high-throughput RNA sequencing (RNAseq) to replace conventional …

RNA sequencing: advances, challenges and opportunities

F Ozsolak, PM Milos - Nature reviews genetics, 2011 - nature.com
RNA-seq technologies: direct RNA sequencing (DRS) 7 and methods for the reliable profiling
of minute RNA … is important for translational research and clinical applications of RNA-seq. …

Evaluation of two main RNA-seq approaches for gene quantification in clinical RNA sequencing: polyA+ selection versus rRNA depletion

S Zhao, Y Zhang, R Gamini, B Zhang, D Von Schack - Scientific reports, 2018 - nature.com
… , but the assessments have relied largely on non-clinical samples. In this study, we evaluated
these two RNA sequencing approaches using human blood and colon tissue samples. Our …

[HTML][HTML] Applications of single-cell and bulk RNA sequencing in onco-immunology

M Kuksin, D Morel, M Aglave, FX Danlos… - European Journal of …, 2021 - Elsevier
… We reviewed standard methods that can boost clinical applications of tumour RNA-seq. …
Clinical positioning of RNA sequencing to personalise onco-immunotherapy treatments from the …

Transcriptome Sequencing (RNA-Seq)

J Reuther, A Roy, FA Monzon - Genomic Applications in Pathology, 2019 - Springer
… We also review current and potential clinical applications of RNA-Seq technology in … In
the paragraphs below, we discuss examples of RNA-Seq applications for different clinical

OneStopRNAseq: a web application for comprehensive and efficient analyses of RNA-Seq data

R Li, K Hu, H Liu, MR Green, LJ Zhu - Genes, 2020 - mdpi.com
… data by biologists, we developed a web application called OneStopRNAseq for the one-… ,
RNAseq has been widely used in many fields, from basic research to clinical applications [32]. …

[HTML][HTML] Comprehensive molecular screening: from the RT-PCR to the RNA-seq

C Costa, A Giménez-Capitán… - … lung cancer research, 2013 - ncbi.nlm.nih.gov
… for several important clinical tests. … clinical applications. A new, simple and effective way
to measure transcriptome composition and to discover new exons or genes is by the RNA-seq. …