… For codon usage more infrequent than the average codon usage, the RSCU is less than one,
and for more frequent usage than the average for the amino acid, the RSCU is greater than …

… of codon usage, Fequal and Fcodon, with the results shown in table 6 . Although codon usage
is … models, and the results of the LRT are robust to assumptions about codon usage bias. …

… We then use these results to define the nonsense error adaptation index (NAI) of the allele or
a … of adaptation to reduce the cost of nonsense errors and increasing adaptation with codon …

… , (2) codon usage and tRNA anticodons coevolve to adapt to … a high degree of codon-anticodon
adaptation. These studies … mutation and selection on codon usage (Chithambaram et al…

… Our discussion of the use of the Codon Adaptation Index has focussed on unicellular
organisms because the determinants of codon usage in multicellular organisms are not well …

… Knowledge of codon usage of plants will therefore help in understanding the molecular
mechanisms of environmental adaptation and biological diversity of each plant species [9]. The …

… Numerous cases of molecular adaptation are being identified in various systems from
viruses to humans. Although previous analyses averaging rates over sites and time have little …

… be considered as a manifestation of some molecular adaptation mechanisms. We develop
a … of a molecular adaptation of viruses toward their hosts, we focus on the codon usage and …

… codon usage of 2,126 human tissue-specific genes expressed in 18 different tissues. We
confirm that synonymous codon usage … variability of synonymous codon usage between tissues …

… Codon usage influences translation elongation speed and regulates … Adaptation of codon
usage to tRNA expression determines the proteome landscape. In addition, codon usage …