MassTRIX reloaded: combined analysis and visualization of transcriptome and metabolome data

B Wägele, M Witting, P Schmitt-Kopplin, K Suhre - PLoS one, 2012 - journals.plos.org
… and pre-analyzed data from metabolomics and transcriptomics … to analyze data from both
transcriptomics and metabolomics … a combined analysis and visualization of metabolomic and …

Combined analysis of transcriptome and metabolome reveals the molecular mechanism and candidate genes of Haloxylon drought tolerance

F Yang, G Lv - Frontiers in Plant Science, 2022 - frontiersin.org
… Transcriptomic and metabolomic analyses were performed to … A combined transcriptome
and metabolome analysis … , transcriptome and metabolome were jointly used to analyze the …

Combined Analysis of Transcriptome and Metabolome Reveals the Potential Mechanism of Coloration and Fruit Quality in Yellow and Purple Passiflora edulis Sims

W Qiu, W Su, Z Cai, L Dong, C Li, M Xin… - Journal of agricultural …, 2020 - ACS Publications
… To reveal the underlying mechanism of color formation in this fruit, a combined analysis of
the metabolome and transcriptome was conducted in this study. The results showed that most …

Combined Analysis of the Fruit Metabolome and Transcriptome Reveals Candidate Genes Involved in Flavonoid Biosynthesis in Actinidia arguta

Y Li, J Fang, X Qi, M Lin, Y Zhong, L Sun… - International journal of …, 2018 - mdpi.com
… phenotypic traits, combined analysis of transcriptome and metabolome has increasingly …
metabolome data, coupled with transcriptome profiling, was carried out in a combined analysis

[HTML][HTML] Combined analysis of transcriptome and metabolome provides insights into nano-selenium foliar applications to improve summer tea quality (Camellia …

X Huang, Q Tang, C Chen, Q Li, H Lin, S Bai, J Zhao… - Lwt, 2023 - Elsevier
… on summer tea leaf quality by integrating metabolomics and transcriptomics approaches.
Nano-Se … A total of 130 compounds were identified in the metabolome. Levels of most phenolic …

Combined Analysis of the Metabolome and Transcriptome to Explore Heat Stress Responses and Adaptation Mechanisms in Celery (Apium graveolens L.)

M Li, J Li, R Zhang, Y Lin, A Xiong, G Tan… - International Journal of …, 2022 - mdpi.com
transcriptome combined with metabolome analyses revealed … Metabolomic and transcriptomic
sequencing have shown … The combined analysis of the transcriptome and metabolome

In-Depth Profiling of Lysine-Producing Corynebacterium glutamicum by Combined Analysis of the Transcriptome, Metabolome, and Fluxome

JO Kromer, O Sorgenfrei, K Klopprogge… - Journal of …, 2004 - Am Soc Microbiol
… gene expression (metabolome, fluxome, and transcriptome, … For this purpose, 13 C flux
analysis with gas chromatography… isotopomer modeling were combined with expression profiling …

Combined Analysis of the Metabolome and Transcriptome Identified Candidate Genes Involved in Phenolic Acid Biosynthesis in the Leaves of Cyclocarya paliurus

W Lin, Y Li, Q Lu, H Lu, J Li - International Journal of Molecular Sciences, 2020 - mdpi.com
… a combined metabolome and transcriptome analysis of … Transcriptome identification
showed that 58 genes were … Association analysis between metabolome and transcriptome

The Combined Analysis of the Transcriptome and Metabolome Revealed the Possible Mechanism of Flower Bud Formation in Amorphophallus bulbifer

W Li, P Xu, C Qian, X Zhao, H Xu, K Li - Agronomy, 2024 - mdpi.com
… In this study, transcriptome and metabolome sequencing analyses of flower buds and leaf
buds in the early growth stage of A. bulbifer were carried out. The results showed that the high …

Combined analysis of transcriptome and metabolome reveals the potential mechanism of the enantioselective effect of chiral penthiopyrad on tomato fruit flavor quality

R Liu, Y Deng, Y Liu, Z Wang, S Yu, Y Nie… - Journal of Agricultural …, 2022 - ACS Publications
… In this study, we determined physiological indexes and combined the analysis of metabolome
and transcriptome to explore the enantioselective effects of PEN on tomato fruit flavor …