Deciphering the mitochondrial genome of Hemerocallis citrina (Asphodelaceae) using a combined assembly and comparative genomic strategy

K Zhang, Y Wang, X Zhang, Z Han… - Frontiers in Plant Science, 2022 - frontiersin.org
… complete mitochondrial genome (mitogenome) assembly of … of gene organization indicated
that six syntenic gene clusters … RNA editing sites in all mitochondrial PCGs, which presented …

Index-free de novo assembly and deconvolution of mixed mitochondrial genomes

BJ McComish, SFK Hills, PJ Biggs… - Genome Biology and …, 2010 - academic.oup.com
genomes was used for deconvolution of the assembled … , we report the complete mollusc
mitochondrial genome of an olive … We first used combined simulated reads from a set of several …

De novo Assembly and Comparative Analyses of Mitochondrial Genomes in Piperales

R Yu, X Chen, L Long, M Jost, R Zhao… - Genome biology and …, 2023 - academic.oup.com
… By combining Illumina short reads and Nanopore long reads, we successfully assembled the
complete mitochondrial genomes … of newly assembled mitochondrial genomes in this study …

De novo hybrid assembly of the salvia miltiorrhiza mitochondrial genome provides the first evidence of the multi-chromosomal mitochondrial DNA structure of salvia …

H Yang, H Chen, Y Ni, J Li, Y Cai, B Ma, J Yu… - International Journal of …, 2022 - mdpi.com
… study assembled mitogenome from total DNAs with a hybrid assembly strategy, combining the
unitig graph assembled … to the mitochondrial genome available in GenBank (NC_023209). …

Complete mitochondrial genome assembly and comparison of Camellia sinensis var. Assamica cv. Duntsa

J Li, H Tang, H Luo, J Tang, N Zhong… - Frontiers in Plant …, 2023 - frontiersin.org
… of C.duntsa were identified using a combination of third-generation sequencing and …
assembled mitochondrial genome was more significant than 268×. Whole mitochondrial genome

Effective extraction and assembly methods for simultaneously obtaining plastid and mitochondrial genomes

W Hao, S Fan, W Hua, H Wang - PLoS One, 2014 - journals.plos.org
… of plastid and mitochondrial genomes, we validated the assembly using PCR and … combined
with our assembly method, this method easily obtains plastid and mitochondrial genomes

Assembly of the complete mitochondrial genome of an endemic plant, Scutellaria tsinyunensis, revealed the existence of two conformations generated by a repeat …

J Li, Y Xu, Y Shan, X Pei, S Yong, C Liu, J Yu - Planta, 2021 - Springer
… We assembled the complete mitochondrial genome of Scutellaria tsinyunensis in this study.
Repeat… in the formation of two conformations of the mitochondrial genome in S. tsinyunensis. …

Assembly and comparative analysis of the complete mitochondrial genome of Bupleurum chinense DC

Y Qiao, X Zhang, Z Li, Y Song, Z Sun - BMC genomics, 2022 - Springer
… , we assembled and annotated the mt genome of the … genome to nuclear genome DNA
fragment transfer, followed by the nuclear genome and plastid genome to mitochondrial genome

Siberian larch (Larix sibirica Ledeb.) mitochondrial genome assembled using both short and long nucleotide sequence reads is currently the largest known …

YA Putintseva, EI Bondar, EP Simonov, VV Sharov… - BMC genomics, 2020 - Springer
… The combination of mtDNA enrichment with short and long reads allowed us to obtain a
genome assembly, which consists of 9 contigs with a total length of 11.7 Mbp. Our assembly

Next-generation sequencing of mixed genomic DNA allows efficient assembly of rearranged mitochondrial genomes in Amolops chunganensis and Quasipaa …

S Yuan, Y Xia, Y Zheng, X Zeng - PeerJ, 2016 - peerj.com
… using the conventional procedure of combining long-range PCR with subsequent primer
walking. Although high-quality mitochondrial genomes have been obtained from NGS for …