Unique bioinformatic approach and comprehensive reanalysis improve diagnostic yield of clinical exomes
K Schmitz-Abe, Q Li, SM Rosen, N Nori… - European Journal of …, 2019 - nature.com
… In summary, reanalysis of negative CES in a research setting … for comprehensive, continued
reanalysis of exome data … a comprehensive strategy for reanalyzing negative exomes as …
reanalysis of exome data … a comprehensive strategy for reanalyzing negative exomes as …
Clinical exome reanalysis: current practice and beyond
J Ji, ML Leung, S Baker, JL Deignan… - Molecular Diagnosis & …, 2021 - Springer
… the clinical utility of exome reanalysis by integrating information from electronic medical …
Screening tests, such as a complete blood count (CBC), are often performed iteratively, and …
Screening tests, such as a complete blood count (CBC), are often performed iteratively, and …
[HTML][HTML] Automated clinical exome reanalysis reveals novel diagnoses
SW Baker, JR Murrell, AI Nesbitt, KB Pechter… - The Journal of Molecular …, 2019 - Elsevier
… , because they significantly reduced the variant analysis burden for each case in the
reanalysis cohort, facilitated a comprehensive literature search based on user-defined patient-…
reanalysis cohort, facilitated a comprehensive literature search based on user-defined patient-…
[HTML][HTML] Systematic reanalysis of clinical exome data yields additional diagnoses: implications for providers
AM Wenger, H Guturu, JA Bernstein, G Bejerano - Genetics in Medicine, 2017 - Elsevier
… reanalyzed exome data with the benefit of up-to-date analysis software and the current literature,
and we applied standard American College of Medical … average over the full time span. …
and we applied standard American College of Medical … average over the full time span. …
Reanalysis of exome negative patients with rare disease: a pragmatic workflow for diagnostic applications
G Schobers, JH Schieving, HG Yntema, M Pennings… - Genome medicine, 2022 - Springer
… We find that upon re-evaluation of undiagnosed patients, both reanalysis of existing ES data
as well … in clinical care, prolonging their diagnostic trajectory, unless systematic reanalysis is …
as well … in clinical care, prolonging their diagnostic trajectory, unless systematic reanalysis is …
[HTML][HTML] A framework of critical considerations in clinical exome reanalyses by clinical and laboratory standards institute
ML Leung, J Ji, S Baker, JG Buchan… - The Journal of Molecular …, 2022 - Elsevier
… This report defines exome reanalysis as the systematic reevaluation of CES data that includes
… on a comprehensive coverage comparison report across the comprehensive exome gene …
… on a comprehensive coverage comparison report across the comprehensive exome gene …
A three-year follow-up study evaluating clinical utility of exome sequencing and diagnostic potential of reanalysis
… sequencing (ES), and genome sequencing (GS) have received increasing attention and
application in clinical diagnostics, owing to its comprehensive and timely diagnostic capacity. …
application in clinical diagnostics, owing to its comprehensive and timely diagnostic capacity. …
[HTML][HTML] Recommendations for next generation sequencing data reanalysis of unsolved cases with suspected Mendelian disorders: a systematic review and meta …
P Dai, A Honda, L Ewans, J McGaughran, L Burnett… - Genetics in …, 2022 - Elsevier
… as clinical exome sequencing (cES) and clinical genome … complete search strategy is shown
in Supplemental Table 1. We further manually examined reference lists from short-listed full …
in Supplemental Table 1. We further manually examined reference lists from short-listed full …
[HTML][HTML] Clinical exome sequencing of 1000 families with complex immune phenotypes: toward comprehensive genomic evaluations
… encompassed clinical exome … reanalysis is a formidable challenge for clinical genetics,
and, to our knowledge, this is the first publication of a systematically implemented reanalysis …
and, to our knowledge, this is the first publication of a systematically implemented reanalysis …
Re-evaluation and re-analysis of 152 research exomes five years after the initial report reveals clinically relevant changes in 18%
… Since extensive re-analysis per case is beyond the resources of most institutions, we
recommend a screening procedure that would quickly identify the majority (83%) of new variants. …
recommend a screening procedure that would quickly identify the majority (83%) of new variants. …
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