… of high homology and full consensus between four of the … of the pipeline, it involves manual
processing of the assembly … assembly stage with a simple change to the pipeline code. …

… It should be noted that like HGAP, the PBcR pipeline is also capable of performing self-correction
and non-… To improve the consensus accuracy of PacBio assemblies, we performed …

… In this protocol, we address these problems of genome quality through a pipeline of … or
other misassemblies in consensus sequences. Every genome assembly algorithm has a unique …

… associated with the bioinformatics pipeline. The consistent … assembly of the sequencing
reads. In general, two approaches can be used to obtain a consensus sequence or an assembly …

… of consensus genome assembly. In Table 2, we show the comparative performance of the
four pipelines … : in one set, the fixed-reference pipelines were used 266 with the default HXB2 …

… Our bioinformatics pipeline uses cloud computing services to assemble and analyze the …
different k-mer assemblies were used to create extended consensus contigs, genes from a …

… pipeline for reconstructing a consensus genome sequence from raw viral amplicon sequence
data is the iVar pipeline (… using Samtools, and a consensus genome sequence is called …

… assemble 45-fold Caenorhabditis elegans data in 9 min, orders of magnitude faster than the
existing pipelines, though the consensus … assembly if we can develop a fast consensus tool …

… , which is independent of reference sequences, possesses the potential to generate a
more complete assembly result including majority consensus sequences and minor variant …

… Such assemblies mislead downstream analyses, from gene … and homozygous contigs
represent a consensus between two or … back to the assembly, the consensus, homozygous contigs …