Pangenomics in crop improvement—from coding structural variations to finding regulatory variants with pangenome graphs
… regulatory elements for crop improvement Mounting evidence supports the importance of
regulatory region variation for crop improvement. … variation in putative regulatory elements and …
regulatory region variation for crop improvement. … variation in putative regulatory elements and …
Lessons from domestication: targeting cis-regulatory elements for crop improvement
G Swinnen, A Goossens, L Pauwels - Trends in plant science, 2016 - cell.com
… For over ten millennia, the domestication of our crops relied only on human selection (…
crop species was followed by the acquisition of improvement traits that are variable among crop …
crop species was followed by the acquisition of improvement traits that are variable among crop …
[HTML][HTML] Engineering quantitative trait variation for crop improvement by genome editing
… animal evolution and domestication, cis-regulatory variants are far from saturated and thus
… -regulatory alleles has also precluded a deeper understanding of how regulatory changes …
… -regulatory alleles has also precluded a deeper understanding of how regulatory changes …
Exploiting induced and natural epigenetic variation for crop improvement
NM Springer, RJ Schmitz - Nature reviews genetics, 2017 - nature.com
… for creating novel epiallelic variants by alteration of DNA methylation or other chromatin
modifications. These tools can be used for crop improvement through epigenome engineering. …
modifications. These tools can be used for crop improvement through epigenome engineering. …
Epigenetics and crop improvement
NM Springer - Trends in genetics, 2013 - cell.com
… crop improvement strategies including the selection for favorable epigenetic states, creation
of novel epialleles, and regulation … the epigenetic variant conferred an improved phenotype. …
of novel epialleles, and regulation … the epigenetic variant conferred an improved phenotype. …
[HTML][HTML] CRISPR/Cas-mediated editing of cis-regulatory elements for crop improvement
… CRE variants for the regulation of complex quantitative traits. … the domestication of natural
CRE variants to regulate complex … CREs for transcriptional regulation for crop improvement. …
CRE variants to regulate complex … CREs for transcriptional regulation for crop improvement. …
Challenges of translating gene regulatory information into agronomic improvements
… mapping analyses to predict regulatory interactions that impact crop improvement. It is …
differences in how regulatory variants were uncovered. An improved understanding of the …
differences in how regulatory variants were uncovered. An improved understanding of the …
Natural and induced epigenetic variation for crop improvement
… categorizes the germplasm into five morphological variants. Although variation in DNA …
our knowledge there's currently no regulation on epigenetically modified crops in the world, …
our knowledge there's currently no regulation on epigenetically modified crops in the world, …
Major impacts of widespread structural variation on gene expression and crop improvement in tomato
… Structural variants (SVs) underlie important crop improvement and domestication traits. …
Compared to SNPs, SVs can cause large-scale perturbations of cis-regulatory regions and are …
Compared to SNPs, SVs can cause large-scale perturbations of cis-regulatory regions and are …
Genetic approaches to crop improvement: responding to environmental and population changes
S Takeda, M Matsuoka - Nature Reviews Genetics, 2008 - nature.com
… variants of interest and putting these to practical use in crop … key regulatory mechanism that
influences two aspects of crop … same regulatory mechanism operates in other crop species, …
influences two aspects of crop … same regulatory mechanism operates in other crop species, …
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