[HTML][HTML] Transcriptome profiling of laser-captured crown root primordia reveals new pathways activated during early stages of crown root formation in rice

J Lavarenne, M Gonin, A Champion, M Javelle… - Plos one, 2020 - journals.plos.org
transcriptome analysis can help to identify genes involved in crown root formation and early
development… of genes expressed in developing crown root primordia in comparison with …

[HTML][HTML] Comparative transcriptome profiling of the maize primary, crown and seminal root in response to salinity stress

M Zhang, X Kong, X Xu, C Li, H Tian, Z Ding - PloS one, 2015 - journals.plos.org
… Our transcriptome analysis revealed that 25 TFs were induced or repressed in response to
salt stress, and these genes were identified from 13 different families including C2H2 like zinc …

Patterns of stress response and tolerance based on transcriptome profiling of rice crown tissue under zinc deficiency

AK Nanda, V Pujol, M Wissuwa - Journal of Experimental Botany, 2017 - academic.oup.com
… , rather than the roots or shoot, as this tissue has received little … crown root development
and subsequent Zn uptake. Here, we investigated transcriptome profiles of ZE and ZI crowns in …

Comparative transcriptome profiling of maize coleoptilar nodes during shoot-borne root initiation

N Muthreich, C Majer, M Beatty, A Paschold… - Plant …, 2013 - academic.oup.com
… as reference time point t0 for crown root development. This allows a more … crown root
development and makes the results of the transcriptome analyses associated with crown root

Transcriptional regulatory network of WOX11 is involved in the control of crown root development, cytokinin signals, and redox in rice

W Jiang, S Zhou, Q Zhang, H Song… - Journal of …, 2017 - academic.oup.com
… To test whether the differentially expressed genes identified in our transcriptome analysis
were directly regulated by WOX11 during crown root development, we selected a subset of six …

A comparative transcriptome analysis leads to new insights into the molecular events governing root formation in mulberry softwood cuttings

W Du, Y Ban, H Nie, Z Tang, X Du, J Cheng - Plant molecular biology …, 2016 - Springer
… type of root formation is available. Here, we compared transcriptome changes during different
root formation … the molecular mechanisms of root formation in mulberry softwood cuttings. …

[HTML][HTML] Transcript profiling of crown rootless1 mutant stem base reveals new elements associated with crown root development in rice

Y Coudert, M Bès, T Van Anh Le, M Pré, E Guiderdoni… - BMC genomics, 2011 - Springer
… Stem bases used for transcriptome analysis were collected from 7 day-old plantlets. For
auxin treatment, seven day-old axenic seedlings were transferred in flasks containing half …

Genome‐wide transcriptome dissection of the rice root system: implications for developmental and physiological functions

H Takehisa, Y Sato, M Igarashi, T Abiko… - The Plant …, 2012 - Wiley Online Library
… comprehensive microarray analysis of the crown root using the … root development and
physiological functions, namely, root … tissue type-specific transcriptome analysis, we separated the …

[HTML][HTML] Transcriptome sequencing analysis of maize roots reveals the effects of substrate and root hair formation in a spatial context

M Ganther, D Vetterlein, A Heintz-Buschart, MT Tarkka - Plant and Soil, 2021 - Springer
Transcriptomic profiling of plant roots can be used to assess how the plant adjusts its gene
expression in relation to environment, genotype and rhizosphere processes; thus enabling us …

Transcriptome analysis of active axillary buds from narrow-crown and broad-crown poplars provides insight into the phytohormone regulatory network for branching …

Y Tian, J Wang, H Guo, K Qu, D Xu, L Hou… - Plant Molecular Biology …, 2021 - Springer
… At the same time, the transcriptome results … development were verified by qRTPCR, which
revealed that the expression patterns were consistent with the results of transcriptome analysis