[HTML][HTML] Characterization of the stress associated microRNAs in Glycine maxby deep sequencing

H Li, Y Dong, H Yin, N Wang, J Yang, X Liu, Y Wang… - BMC plant biology, 2011 - Springer
… To validate the expression pattern of miRNAs by deep sequencing, we randomly selected
ten miRNAs (miR156f, miR167d, miR169d, miR393a, miR394a, miR482, miR1507a, …

MicroRNA sequence and expression analysis in breast tumors by deep sequencing

TA Farazi, HM Horlings, JJ Ten Hoeve, A Mihailovic… - Cancer research, 2011 - AACR
miRNA precursor processing). Resetting the threshold to 5,000 reads, we identified 231 miRNA
and miRNA … of analysis of deep sequencing data from a pool of 770 synthetic miRNAs (M…

Expression profiling of microRNAs by deep sequencing

CJ Creighton, JG Reid… - Briefings in bioinformatics, 2009 - academic.oup.com
… gene expression data to identify putative microRNA:mRNA functional pairs. Here … microRNA
expression data from deep sequencing. deep sequencing, expression profiling, microRNA

[HTML][HTML] Systematic analysis of small RNAs associated with human mitochondria by deep sequencing: detailed analysis of mitochondrial associated miRNA

L Sripada, D Tomar, P Prajapati, R Singh, AK Singh… - 2012 - journals.plos.org
miRNA with mitochondria has not been well studied. We planned to use deep sequencing
… The deep sequencing method of fractionated RNA has become one of the most powerful …

Characterization of skin ulceration syndrome associated microRNAs in sea cucumber Apostichopus japonicus by deep sequencing

C Li, W Feng, L Qiu, C Xia, X Su, C Jin, T Zhou… - Fish & Shellfish …, 2012 - Elsevier
… In this study, two haemocytes miRNA libraries were constructed with deep sequenced by
illumina Hiseq2000 from healthy (L1) and skin ulceration syndrome Apostichopus japonicus …

[HTML][HTML] Genome-wide analyses of radioresistance-associated miRNA expression profile in nasopharyngeal carcinoma using next generation deep sequencing

G Li, Y Qiu, Z Su, S Ren, C Liu, Y Tian, Y Liu - PloS one, 2013 - journals.plos.org
… study, high-throughput deep sequencing technology was applied to both identify known
miRNAs associated with NPC radioresistance and discover novel miRNAs associated with NPC …

miRBase: integrating microRNA annotation and deep-sequencing data

A Kozomara, S Griffiths-Jones - Nucleic acids research, 2010 - academic.oup.com
… novel microRNA discovery. We have mapped reads from short RNA deep-sequencing
experiments to microRNAs in … The user can view all read data associated with a given microRNA

[HTML][HTML] Characterization of microRNA transcriptome in lung cancer by next-generation deep sequencing

J Ma, K Mannoor, L Gao, A Tan, MA Guarnera… - Molecular …, 2014 - Elsevier
… was associated with lymph node metastasis. This study presents the earliest use of deep
sequencing for profiling miRNAs in lung tumor specimens. The identified miRNA signatures …

[HTML][HTML] Small RNA expression and deep sequencing analyses of the nucleolus reveal the presence of nucleolus-associated microRNAs

B Bai, H Liu, M Laiho - FEBS open bio, 2014 - Elsevier
… of miRNAs in the nucleolus, which contains an abundance of small non-coding RNAs. We
employed two miRNA expression array platforms and small RNA deep sequencing of small …

[HTML][HTML] Deep sequencing reveals microRNAs predictive of antiangiogenic drug response

J García-Donas, B Beuselinck, L Inglada-Pérez… - JCI insight, 2016 - ncbi.nlm.nih.gov
miRNAs predictive of progressive disease under TKI treatment through deep sequencing of
… Twenty-nine miRNAs were differentially expressed in the tumors of patients who progressed …