Characterization of the stress associated microRNAs in Glycine maxby deep sequencing

H Li, Y Dong, H Yin, N Wang, J Yang, X Liu, Y Wang… - BMC plant biology, 2011 - Springer
stress responses (drought, salinity, and alkalinity) have been identified and analyzed in
combination with deep sequencing … and are differentially expressed in response to certain stress. …

Deep sequencing-based characterization of transcriptome of Pyrus ussuriensis in response to cold stress

T Yang, XS Huang - Gene, 2018 - Elsevier
… the cold stress response is still … characterized the expression of a large number of
genes, especially those differentially expressed during cold response using Illumina deep-sequencing

Deep sequencing-based characterization of transcriptome of trifoliate orange (Poncirus trifoliata (L.) Raf.) in response to cold stress

M Wang, X Zhang, JH Liu - BMC genomics, 2015 - Springer
… PtADC, and PtrbHLH, have been functionally characterized and shown to play key roles in
… cold stress was performed, using the Illumina-based paired-end deep sequencing platform. …

Genome-wide profiling of novel and conserved Populus microRNAs involved in pathogen stress response by deep sequencing

L Chen, Y Ren, Y Zhang, J Xu, Z Zhang, Y Wang - Planta, 2012 - Springer
Deep sequencing provides an opportunity to identify pathogen-regulated miRNAs in trees,
which will help in understanding the regulatory mechanisms of plant defense responses …

Transcriptome profile analysis of maize seedlings in response to high-salinity, drought and cold stresses by deep sequencing

X Shan, Y Li, Y Jiang, Z Jiang, W Hao… - Plant molecular biology …, 2013 - Springer
stresses in maize. Previous reports have studied individual genes or groups of genes under
stresses; to obtain a broader understanding of the response of maize to abiotic stresses, we …

Identification of novel and conserved microRNAs related to drought stress in potato by deep sequencing

N Zhang, J Yang, Z Wang, Y Wen, J Wang, W He… - PloS one, 2014 - journals.plos.org
… ] and high-throughput sequencing [26]. However, … stress. Here we report deferentially
expressed known and novel miRNAs related to drought stress in the potato using deep sequencing

Deep sequencing analysis of transcriptomes in Aspergillus oryzae in response to salinity stress

B He, L Ma, Z Hu, H Li, M Ai, C Long, B Zeng - Applied microbiology and …, 2018 - Springer
… oryzae against salinity stress are poorly understood. In this study, we successfully characterized
… oryzae in response to salinity stress. The results showed that salt treatment of A. oryzae …

Deep sequencing reveals important roles of microRNAs in response to drought and salinity stress in cotton

F Xie, Q Wang, R Sun, B Zhang - Journal of experimental botany, 2015 - academic.oup.com
… response to those stresses were investigated. Using next-generation deep sequencing, a …
salinity and drought stresses through targeting a series of stress-related genes. Degradome …

Genome-wide annotation of genes and noncoding RNAs of foxtail millet in response to simulated drought stress by deep sequencing

X Qi, S Xie, Y Liu, F Yi, J Yu - Plant Molecular Biology, 2013 - Springer
characterize the potential roles of siRNA in drought stress response, we investigated the sRNA
expression profiles by deep sequencing … for the RNA-Seq samples with two independent …

Analysis of the Drought Stress-Responsive Transcriptome of Black Cottonwood (Populus trichocarpa) Using Deep RNA Sequencing

S Tang, Y Dong, D Liang, Z Zhang, CY Ye… - Plant Molecular Biology …, 2015 - Springer
… we characterized the drought stress-responsive transcriptome in this tree species by employing
high-throughput Illumina PE sequencing… When better characterized, these transcriptomic …