[HTML][HTML] Comprehensive survey of human brain microRNA by deep sequencing

NY Shao, HY Hu, Z Yan, Y Xu, H Hu, C Menzel, N Li… - BMC genomics, 2010 - Springer
… In rhesus macaques, we find additional 65 putative conserved miRNA, all of which can
also be found in the human genome, but are not expressed in the human dataset. …

Identification of the conserved and novel microRNAs by deep sequencing and prediction of their targets in Topmouth culter

Y Huang, W Gong, H Ren, J Xiong, X Gao, X Sun - Gene, 2017 - Elsevier
… , and with an average of 11.6 targets for a novel miRNA) (Table S7). The most miRNAs
have > 2 targets. The targets of remaining 179 conserved miRNAs and one novel miRNA (miR-…

[HTML][HTML] Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaeaL.)

CZ Zhao, H Xia, TP Frazier, YY Yao, YP Bi, AQ Li… - BMC plant biology, 2010 - Springer
… Combining the deep sequencing and bioinformatics, we discovered 14 novel miRNA families
as well as 75 conserved miRNAs in peanuts. All 14 novel peanut miRNAs are considered …

[HTML][HTML] Identifying Conserved and Novel MicroRNAs in Developing Seeds of Brassica napus Using Deep Sequencing

AP Koerbes, RD Machado, F Guzman, MP Almerao… - PloS one, 2012 - journals.plos.org
miRNA families were detected through a computational analysis of a large number of reads
obtained from deep sequencing two small RNA and two RNA-seq … by deep sequencing the …

[HTML][HTML] Deep sequencing discovery of novel and conserved microRNAs in trifoliate orange (Citrus trifoliata)

C Song, C Wang, C Zhang, NK Korir, H Yu, Z Ma… - BMC genomics, 2010 - Springer
… 10 new potential miRNAs and 42 highly conserved miRNA families, indicating that specific
… Through deep sequencing we also identified ten species-specific miRNAs whose precursors …

Expression profiling of microRNAs by deep sequencing

CJ Creighton, JG Reid… - Briefings in bioinformatics, 2009 - academic.oup.com
microRNA:mRNA functional pairs. Here we discuss tools and methodologies for the analysis
of microRNA expression data from deep sequencingconservation of the mature microRNA, …

[HTML][HTML] Identification of novel and conserved microRNAs related to drought stress in potato by deep sequencing

N Zhang, J Yang, Z Wang, Y Wen, J Wang, W He… - PloS one, 2014 - journals.plos.org
… and novel miRNAs related to drought stress in the potato using deep sequencing. Moreover
we … of the miRNAs and identify potential drought-responsive miRNAs and their target genes. …

Genome-wide profiling of novel and conserved Populus microRNAs involved in pathogen stress response by deep sequencing

L Chen, Y Ren, Y Zhang, J Xu, Z Zhang, Y Wang - Planta, 2012 - Springer
… We identified 74 unique miRNA sequences belonging to 37 conserved miRNA families in …
We sequenced 74 conserved miRNA sequences and 27 predicted novel miRNA sequences (…

Discovery and profiling of novel and conserved microRNAs during flower development in Carya cathayensis via deep sequencing

ZJ Wang, JQ Huang, YJ Huang, Z Li, BS Zheng - Planta, 2012 - Springer
… hickory to identify miRNAs related to flower development. We identified 39 conserved miRNA
… well as two novel and ten potential novel miRNAs belonging to nine families. Moreover, 35 …

Conservation and divergence in plant microRNAs

MW Jones-Rhoades - Plant molecular biology, 2012 - Springer
… Why is deep sequencing so useful in miRNA identification? A simple (but apt) reason is
that analyzing large numbers of reads increases the odds of recovering rare transcripts. …