… the DNA replication and transcription apparatus, but devoid of … This first application of the
deep mRNA sequencing … view of Mimivirus complex transcriptional landscape that can now be …

… in our case as we used a reference assembly), sequencing errors (454 sequencing technology
is known to produce sequencing errors around homopolymer stretches), splice variants, …

… correlation between transcription and the DNAme landscape in the following integrated
approach. We sought to generate a high-quality transcriptome annotation by deep RNA-Seq of …

… associated with transcriptionally active genes, and H3K27me3 and DNA methylation
predominantly being found in transcriptionally inactive genes and repetitive elements (see Figure …

… and transcription factors that drive them. Finally we discovered a core group of transcription
… This study characterizes the transcriptional landscape of GBM and introduces ChRO-seq as …

… Deep sequencing of the mutant promoters in each FACS batch yielded a long list of … In this
way, we demonstrate how deep sequencing can be used to measure protein-DNA and protein…

… transcription start sites (TSSs) cluster in both narrow and broad genomic windows. Here we
describe a paired-end sequencing … to explore the transcription initiation landscape in the …

… genome sequences and transcriptional landscapes that can be … 7D transcriptional landscape
and quantification We explored the transcriptional landscape using direct RNA sequencing …

… We compared the transcriptional landscape of lung cancers between ever-smokers and
never-smokers. There was a significant difference in the number of point mutations between the …

… identify the genomic sites of transcription factor binding, chromatin marks, … sequencing cost
of deep sequencing 29,30 . Indeed, even ultra-low-coverage sequencing (that is, sequencing …