A quantum chemical study of photoinduced DNA repair: on the splitting of pyrimidine model dimers initiated by electron transfer

AA Voityuk, ME Michel-Beyerle… - … of the American Chemical …, 1996 - ACS Publications
… to complexes of free nucleic bases, may be disfavored in DNA since they might require …
realistic quantum chemical models that include DNA backbone deformations in photolyase−DNA

Mg/Ca binding to DNA bases: a quantum chemical method and ABEEMσπ/MM fluctuating charge model study.

CY Yu, Y Yu, LD Gong, ZZ Yang - Theoretical Chemistry …, 2012 - search.ebscohost.com
base is greater than that of Ca2?-base. The ABEEMrp/MM potential gives reasonable geometries
and binding energies compared with the present quantum chemical … tautomer of bases, …

The hydrogen-bonded complexes of the 5-fluorouracil with the DNA purine bases: a comprehensive quantum chemical study

E Nakhaei, A Nowroozi, F Ravari - Structural Chemistry, 2018 - Springer
… and inhibiting DNA … purine bases, as the final targets of anticancer drugs, is published.
Hence, in the present study, the interactions between the FU and the DNA and RNA purine bases, …

Hydrogen bonding in DNA base pairs: reconciliation of theory and experiment

C Fonseca Guerra, FM Bickelhaupt… - … American Chemical …, 2000 - ACS Publications
… Our purpose is to find and understand the source of this apparent disagreement using
modern density functional theory (DFT) and, in this way, to arrive at a suitable quantum chemical

Characterization of the active site of DNA polymerase β by molecular dynamics and quantum chemical calculation

RC Rittenhouse, WK Apostoluk… - Proteins: Structure …, 2003 - Wiley Online Library
… correcting damage to genomic DNA,5 involves a … DNA by a DNA glycosylase that is able
to recognize a modified (damaged) base, bind at the site of the damage, and remove the base, …

Synthesis, spectral and quantum chemical studies and use of (E)-3-[(3, 5-bis (trifluoromethyl) phenylimino) methyl] benzene-1, 2-diol and its Ni (II) and Cu (II) …

H Ünver, B Boyacıoğlu, CT Zeyrek, M Yıldız… - Journal of Molecular …, 2016 - Elsevier
… compounds and calf thymus DNA (CT-DNA) showed that the compounds interacts with
CT-DNA via intercalative binding. A DNA cleavage study showed that the Cu(II) complex cleaved …

[图书][B] The quantum theory of atoms in molecules: from solid state to DNA and drug design

A Becke - 2007 - books.google.com
… not about technical matters such as basis sets or levels of electron correlation. We talked
about densities and probabilities in chemical systems, what makes a chemical bond, what is an …

Binding of cationic and neutral phenanthridine intercalators to a DNA oligomer is controlled by dispersion energy: quantum chemical calculations and molecular …

T Kubař, M Hanus, F Ryjáček… - Chemistry–A European …, 2006 - Wiley Online Library
… Studying the formation of various DNA base pairs in vacuo by ab initio … base pairs. The
critical values determining the final ΔG are thus the stabilization energy of the ethidium⋅⋅⋅DNA

Reference quantum chemical calculations on RNA base pairs directly involving the 2′-OH group of ribose

J Sponer, M Zgarbová, P Jurecka… - Journal of Chemical …, 2009 - ACS Publications
base pairing does not occur in DNA and is essential for functional RNAs. We report reference
quantum chemical calculations of base … RNA base pairs utilizing the ribose moiety for base

Analysis of actinomycin D–DNA model complexes using a quantum-chemical criterion: Mulliken overlap populations

C Bendic, M Enache, E Volanschi - Journal of Molecular Graphics and …, 2005 - Elsevier
Quantum-chemical methods (ab initio with inclusion of electron … of basebase and
deoxyribose–base-stacking interactions in B-DNA and Z-DNA, for which older quantum-chemical