[HTML][HTML] Classification and experimental identification of plant long non-coding RNAs
… Plants have evolved two additional non-redundant polymerases (Pol IV and V) that … by RNA
mediated DNA methylation (RdDM) [38]. The plant specific multi-subunit RNA Polymerase IV …
mediated DNA methylation (RdDM) [38]. The plant specific multi-subunit RNA Polymerase IV …
Functions of plants long non-coding RNAs
… in Nongken 58S is caused by the increased DNA methylation in LDMAR promoter region
through the so-called RNA-directed DNA methylation (RdDM) pathway (for more details about …
through the so-called RNA-directed DNA methylation (RdDM) pathway (for more details about …
… of Argonaute 4-Associated Long Non-Coding RNA in Arabidopsis thaliana Sheds Novel Insights into Gene Regulation through RNA-Directed DNA Methylation
PCK Au, ES Dennis, MB Wang - Genes, 2017 - mdpi.com
… , undeniable that the complexity of RdDM is beyond what we have presented here and more
effort is required to understand RNA-induced DNA methylation and its function(s) in plants. …
effort is required to understand RNA-induced DNA methylation and its function(s) in plants. …
DNA and coding/non‐coding RNA methylation analysis provide insights into tomato fruit ripening
S Guo, Y Zheng, D Meng, X Zhao, Z Sang… - The Plant …, 2022 - Wiley Online Library
… Targets of long non-coding RNAs and circular RNAs with different m5C sites were also …
ethylene emission is affected by DNA methylation (5mC), we examined the changes in DNA …
ethylene emission is affected by DNA methylation (5mC), we examined the changes in DNA …
Transposon-derived non-coding RNAs and their function in plants
J Cho - Frontiers in plant science, 2018 - frontiersin.org
… In plants, the RNA-directed DNA methylation (RdDM) pathway plays a central role in TE …
marked by DNA methylation are recognized by the plant-specific RNA polymerase, RNA PolIV, …
marked by DNA methylation are recognized by the plant-specific RNA polymerase, RNA PolIV, …
Long non-coding RNAs and their biological roles in plants
… In plants, although a large number of lncRNA transcripts have been predicted and identified
in … , bioinformatics, resources, and current exploration of their biological functions in plants. …
in … , bioinformatics, resources, and current exploration of their biological functions in plants. …
When junk DNA turns functional: transposon-derived non-coding RNAs in plants
FD Ariel, PA Manavella - Journal of experimental botany, 2021 - academic.oup.com
… maintains DNA methylation by the production of RNAPIV-/RDR2-/DCL3-dependent 24 nt
het-siRNAs. Het-siRNA can be loaded into AGO4, AGO6, or AGO3 to trigger DNA methylation …
het-siRNAs. Het-siRNA can be loaded into AGO4, AGO6, or AGO3 to trigger DNA methylation …
Long non-coding RNA in plants in the era of reference sequences
… players driving RNA-mediated DNA methylation (RdDM). … , plant lncRNAs with known
functions are classified as long intergenic non-coding RNAs (lincRNAs), intronic non-coding RNAs …
functions are classified as long intergenic non-coding RNAs (lincRNAs), intronic non-coding RNAs …
Research progress on plant long non-coding RNA
L Wu, S Liu, H Qi, H Cai, M Xu - Plants, 2020 - mdpi.com
… In addition, the transcription, splicing patterns, and secondary structure of lncRNAs are also
regulated by RNA modification, DNA methylation, and histone modification [8,9]. For miRNAs…
regulated by RNA modification, DNA methylation, and histone modification [8,9]. For miRNAs…
Non-coding RNAs and transposable elements in plant genomes: emergence, regulatory mechanisms and roles in plant development and stress responses
J Hou, D Lu, AS Mason, B Li, M Xiao, S An, D Fu - Planta, 2019 - Springer
… Second, Pol IV and Pol V-dependent lncRNAs induce RNA-directed DNA methylation to
decrease the expression level of a target gene (Fig. 3a) (Kim and Sung 2012). Third, lncRNAs …
decrease the expression level of a target gene (Fig. 3a) (Kim and Sung 2012). Third, lncRNAs …