Non-coding RNAs as emerging targets for crop improvement

A Summanwar, U Basu, H Rahman, NNV Kav - Plant Science, 2020 - Elsevier
… for DNA methylation, via the RNA-directed DNA methylation (RdDM) pathway also known as,
a plant de novo DNA methylation … In spite of an increasing number of studies in plants, our …

Non-coding RNAs in the plant response to abiotic stress

C Contreras-Cubas, M Palomar, M Arteaga-Vázquez… - Planta, 2012 - Springer
… long non-coding RNAs (lncRNA), and highlight the importance of these molecules in the plant
… DRM2 catalyses de novo DNA methylation in plants, while DNA methylation is maintained …

Long non-coding RNAs: Fine-tuning the developmental responses in plants

R Datta, S Paul - Journal of Biosciences, 2019 - Springer
… Activated RNA pol IV/V facilitates siRNA-mediated DNA methylation on the APOLO locus
which is necessary to stabilize the loop. This down-regulates the PID transcription. The …

RNA-directed DNA methylation in plants

A Movahedi, W Sun, J Zhang, X Wu, M Mousavi… - Plant cell reports, 2015 - Springer
… RdDM is driven by non-coding RNAs (ncRNAs) produced by DNA-dependent … In animals,
non-coding RNAs (ncRNAs) are generated only by DNA-dependent RNA polymerase II (PolII), …

Non-coding RNAs in transcriptional regulation

YCA Chen, AA Aravin - Current molecular biology reports, 2015 - Springer
plants, Drosophila, Caenorhabditis elegans, and mice. Furthermore, a rapidly growing number
of long non-coding RNAs (… positive feedback loop that further enhances DNA methylation. …

Plant long non-coding RNAs in the regulation of transcription

JA Chekanova - Essays in Biochemistry, 2021 - portlandpress.com
… polymerases Pol IV and Pol V, which act in gene silencing in the RNA-directed DNA
methylation (RdDM) pathway or in determining heterochromatin boundaries, are outside the scope …

Regulatory non-coding RNAs: a new frontier in regulation of plant biology

S Bhogireddy, SK Mangrauthia, R Kumar… - Functional & Integrative …, 2021 - Springer
… biogenesis of non-coding RNAs. a Non-… non-coding RNAs pathway includes the action of
RNases on both precursor tRNAs (pre tRNA) and mature tRNAs that give rise to small RNAs

RNA-directed DNA methylation in plants: Where to start?

H Zhang, X He, JK Zhu - RNA biology, 2013 - Taylor & Francis
… , including small interfering RNAs (siRNA) and piwi-interacting RNAs (piRNA), … or DNA
methylation to loci with sequence homology, usually by base pairing with long non-coding RNAs (…

Long non-coding RNAs: new players in plants

Z Zhao, S Zang, W Zou, YB Pan, W Yao, C You… - International Journal of …, 2022 - mdpi.com
… Pol V can generate scaffold transcripts essential for the recognition of target genes and
ultimately chromatin modification by the RdDM (RNA directed DNA methylation) pathway [28]. …

Biogenesis and function of rice small RNAs from non-coding RNA precursors

S Arikit, J Zhai, BC Meyers - Current opinion in plant biology, 2013 - Elsevier
… of the biogenesis and function of non-coding RNAs that generate small RNAs in rice. …
RNAs in plants are hc-siRNAs. These siRNAs are usually 24-nt long and guide DNA methylation