Conservation and divergence in eukaryotic DNA methylation

T Lee, J Zhai, BC Meyers - Proceedings of the National …, 2010 - National Acad Sciences
… Their data allowed a comprehensive comparison of whole-genome methylation profiles …
and divergent features of DNA methylation in eukaryotes. Although DNA methylation appears to …

The interplay between DNA methylation and sequence divergence in recent human evolution

I Hernando-Herraez, H Heyn… - Nucleic acids …, 2015 - academic.oup.com
… To gain insights into the relationship between nucleotide sequence and DNA methylation
levels, we analyzed the DNA methylation patterns of regions whose sequence genealogy …

DNA methylation: shared and divergent features across eukaryotes

RJ Schmitz, ZA Lewis, MG Goll - Trends in Genetics, 2019 - cell.com
… to simply as DNA methylation, in … of DNA methylation may be more diverse and complex
than was previously appreciated. We summarize the current understanding of DNA methylation

Conservation and divergence of DNA methylation in eukaryotes: new insights from single base-resolution DNA methylomes

Z Su, L Han, Z Zhao - Epigenetics, 2011 - Taylor & Francis
… Even so, many specific functions of DNA methylation and their underlying … for DNA methylation
profiling and then systematically review the features of whole genome DNA methylation

[HTML][HTML] Base-pair resolution DNA methylation sequencing reveals profoundly divergent epigenetic landscapes in acute myeloid leukemia

A Akalin, FE Garrett-Bakelman, M Kormaksson… - PLoS …, 2012 - journals.plos.org
DNA methylation plays a role in gene expression regulation, and abnormal distribution of
DNA methylation … Here we demonstrate that changes in DNA methylation in AML are not …

[HTML][HTML] Divergence of gene body DNA methylation and evolution of plant duplicate genes

J Wang, NC Marowsky, C Fan - PloS one, 2014 - journals.plos.org
… Here, we aim to determine how divergence of DNA methylation level and pattern in gene
body is associated with expression divergence and evolution of duplicate genes in plant …

DNA methylation and evolution of duplicate genes

TE Keller, SV Yi - Proceedings of the National Academy of …, 2014 - National Acad Sciences
… We found that the relative DNA methylation divergence and evolutionary age are positively
… display similar levels of methylation (relative DNA methylation divergence is small) compared …

Conservation and divergence of methylation patterning in plants and animals

S Feng, SJ Cokus, X Zhang, PY Chen… - Proceedings of the …, 2010 - National Acad Sciences
… , determining precise genome-scale methylation patterns has been a … sequencing technology.
In this paper, we generated shotgun bisulfite sequencing data to profile DNA methylation

DNA methylation entropy is associated with DNA sequence features and developmental epigenetic divergence

Y Fang, Z Ji, W Zhou, J Abante… - Nucleic acids …, 2023 - academic.oup.com
… the role of the underlying DNA sequence itself in its control or … theory method to measure
DNA methylation mean and entropy … DNA methylation sequencing data, but also complete DNA

Conserved and divergent patterns of DNA methylation in higher vertebrates

N Jiang, L Wang, J Chen, L Wang… - Genome biology and …, 2014 - academic.oup.com
… the DNA methylation system in eukaryotes through examining the fully sequenced genomes
… Using extensive data sets of DNA methylation and gene expression from human and mouse …