Effectiveness of genomic prediction of maize hybrid performance in different breeding populations and environments

VS Windhausen, GN Atlin, JM Hickey… - G3: Genes| genomes …, 2012 - academic.oup.com
… variants underlying the predicted traits. Potential uses for genomic prediction in maize hybrid
… scenario in which genomic prediction should be applied (ie, prediction among or within …

Increasing accuracy and reducing costs of genomic prediction by marker selection

MB e Sousa, G Galli, DH Lyra, ÍSC Granato, FI Matias… - Euphytica, 2019 - Springer
… They used same set of rice data adopted in our study and found that approximately 5000
SNPs were effective to predict and suggest the possible use of smaller fixed SNP arrays. …

Understanding the effectiveness of genomic prediction in tetraploid potato

S Wilson, C Zheng, C Maliepaard, HA Mulder… - Frontiers in Plant …, 2021 - frontiersin.org
… models for genomic prediction in tetraploid potato. As a secondary focus, a genome wide …
and thus explain the reasons for differences in prediction accuracies from trait to trait. The …

Effectiveness of genomic prediction on milk flow traits in dairy cattle

KA Gray, JP Cassady, Y Huang, C Maltecca - Genetics Selection …, 2012 - Springer
… [2] reported an increase in reliabilities of US genomic predictions using an Illumina 50 k
panel [3] as compared to predictions of genetic merit based on traditional parental averages. …

Performance of genomic prediction within and across generations in maritime pine

J Bartholomé, J Van Heerwaarden, F Isik, C Boury… - BMC genomics, 2016 - Springer
… The smaller effective population size in this study, measured as status number (N S = 25),
than in a previous study (N S ≈ 100) and the inclusion of multiple generations might account …

Using information of relatives in genomic prediction to apply effective stratified medicine

SH Lee, WMSP Weerasinghe, NR Wray, ME Goddard… - Scientific reports, 2017 - nature.com
… A key parameter for determining the accuracy of the genomic prediction is M e , the effective
… on effective population size N e , the number of chromosomes and the length of genomic

[HTML][HTML] Accuracy of genomic prediction using low-density marker panels

Z Zhang, X Ding, J Liu, Q Zhang, DJ de Koning - Journal of dairy science, 2011 - Elsevier
… numbers of QTL relative to number of effective chromosomal segments, heritabilities, and
effective population size. To implement genomic prediction with LD panels, breeders need to …

Genomic selection: genome-wide prediction in plant improvement

ZA Desta, R Ortiz - Trends in plant science, 2014 - cell.com
genome on the target population based on a prediction model developed in the training
population (TP). Whole-genome prediction … Here, we review several genomic selection (GS) …

Genomic prediction: progress and perspectives for rice improvement

J Bartholomé, PT Prakash, JN Cobb - Genomic Prediction of Complex …, 2022 - Springer
… for the integration of genomic prediction into a rice breeding … for genomic selection in a
breeding scheme, the effective … to assess the effectiveness of genomic prediction . Almost all …

Utility of whole-genome sequence data for across-breed genomic prediction

B Raymond, AC Bouwman, C Schrooten… - Genetics Selection …, 2018 - Springer
Background Genomic prediction (GP) across breeds has so far resulted in low accuracies of
the predicted genomic breeding values. Our objective was to evaluate whether using whole-…